| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g004315m |
| Family | GH2 |
| Protein Properties | Length: 762 Molecular Weight: 85760.5 Isoelectric Point: 6.7511 |
| Chromosome | Chromosome/Scaffold: 00295 Start: 117051 End: 124942 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH2 | 2 | 627 | 0 |
| PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPR WYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTP STDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNG LLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKISNTNFFETTQGLEFSWVAHGDGYKLGFGILSLPLIKPHSNYEIELKSSPWYSQWNSCSAEEIFLTVT AKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGG ESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLE QSMDKIKFYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 762 Download |
| MPRLWSAEQP NLYTLVVILK HASGPVVDCE SCLVGIRQVS KAPKQLLVNG NPVVIRGVNR 60 HEHHPRVGKT NIESCMVKDL VLMKQNNINA VRNSHYPQHP RWYELCDLFG LYMIDEANIE 120 THGFYFSEHL KHPTMEPSWA AAMMDRVIGM VERDKNHASI ICWSLGNEAG HGPNHSAAAG 180 WIRGKDPSRL LHYEGGGSRT PSTDIVCPMY MRVWDIVMIA KDPTETRPLI LCEYSHAMGN 240 SNGNIHEYWE AIDSTFGLQG GFIWDWVDQG LLRELADGTK HWAYGGDFGD TPNDLNFCLN 300 GLLWPDRTPH PALHEVKYVY QAIKVSLKKG TLKISNTNFF ETTQGLEFSW VAHGDGYKLG 360 FGILSLPLIK PHSNYEIELK SSPWYSQWNS CSAEEIFLTV TAKLMNSTRW AEAGHVISTA 420 QVQLPSKRER LPHVIRTGDA IILQENLGNT IQLSHQNSWE IKFDIQTGAV ESWKVEGVSV 480 MKRGIFPCFW RAPTDNDKGG GESSYYSRWR AAGIDSLVFL TKSCSIQNVT DYFVKIRVVY 540 DGTPRVDMSS LTKLEKAKAL FEIVIDYTIY GSGNVIVECN FKPNTSDLPP LPRVGVEFHL 600 EQSMDKIKFY GRGPFECYPD RKAAAHVDVY EQIVGDMHVP YIVPGECAAR ADVRWVTFQN 660 KEGIGIYASM YSSSPPMQLN ASYYTTTELD RATHNEQLVK EDKIEVHLDH KHMGLGGDDS 720 WTPCVHDKYL VPAVAYSFSI RLSPLTAATS GYGIYKSQMQ N* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 5.0e-99 | 457 | 742 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| COG3250 | LacZ | 1.0e-107 | 2 | 625 | 636 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam02836 | Glyco_hydro_2_C | 8.0e-113 | 43 | 324 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 2.0e-180 | 2 | 748 | 754 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 2 | 744 | 765 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 2 | 761 | 356 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 2 | 761 | 356 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 761 | 354 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 2 | 761 | 355 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 761 | 355 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 2 | 740 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 2 | 740 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 2 | 740 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 2 | 740 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz7_D | 0 | 2 | 740 | 298 | 1018 | A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DY305670 | 416 | 166 | 570 | 0 |
| CX077400 | 289 | 452 | 740 | 0 |
| DN959395 | 292 | 287 | 578 | 0 |
| FC922106 | 278 | 166 | 443 | 0 |
| EY758607 | 277 | 390 | 666 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |