| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g004363m |
| Family | GH2 |
| Protein Properties | Length: 760 Molecular Weight: 85528.3 Isoelectric Point: 6.8104 |
| Chromosome | Chromosome/Scaffold: 00295 Start: 117051 End: 124942 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 2 | 625 | 0 |
| PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPR WYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTP STDIVCPMYMRVWDIVMIAKDPTETRPLILYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNGLL WPDRTPHPALHEVKYVYQAIKVSLKKGTLKISNTNFFETTQGLEFSWVAHGDGYKLGFGILSLPLIKPHSNYEIELKSSPWYSQWNSCSAEEIFLTVTAK LMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGES SYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQS MDKIKFYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 760 Download |
| MPRLWSAEQP NLYTLVVILK HASGPVVDCE SCLVGIRQVS KAPKQLLVNG NPVVIRGVNR 60 HEHHPRVGKT NIESCMVKDL VLMKQNNINA VRNSHYPQHP RWYELCDLFG LYMIDEANIE 120 THGFYFSEHL KHPTMEPSWA AAMMDRVIGM VERDKNHASI ICWSLGNEAG HGPNHSAAAG 180 WIRGKDPSRL LHYEGGGSRT PSTDIVCPMY MRVWDIVMIA KDPTETRPLI LYSHAMGNSN 240 GNIHEYWEAI DSTFGLQGGF IWDWVDQGLL RELADGTKHW AYGGDFGDTP NDLNFCLNGL 300 LWPDRTPHPA LHEVKYVYQA IKVSLKKGTL KISNTNFFET TQGLEFSWVA HGDGYKLGFG 360 ILSLPLIKPH SNYEIELKSS PWYSQWNSCS AEEIFLTVTA KLMNSTRWAE AGHVISTAQV 420 QLPSKRERLP HVIRTGDAII LQENLGNTIQ LSHQNSWEIK FDIQTGAVES WKVEGVSVMK 480 RGIFPCFWRA PTDNDKGGGE SSYYSRWRAA GIDSLVFLTK SCSIQNVTDY FVKIRVVYDG 540 TPRVDMSSLT KLEKAKALFE IVIDYTIYGS GNVIVECNFK PNTSDLPPLP RVGVEFHLEQ 600 SMDKIKFYGR GPFECYPDRK AAAHVDVYEQ IVGDMHVPYI VPGECAARAD VRWVTFQNKE 660 GIGIYASMYS SSPPMQLNAS YYTTTELDRA THNEQLVKED KIEVHLDHKH MGLGGDDSWT 720 PCVHDKYLVP AVAYSFSIRL SPLTAATSGY GIYKSQMQN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 7.0e-99 | 455 | 740 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| COG3250 | LacZ | 5.0e-104 | 2 | 623 | 636 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam02836 | Glyco_hydro_2_C | 2.0e-108 | 43 | 322 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 7.0e-176 | 2 | 746 | 754 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 2 | 742 | 765 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 2 | 759 | 356 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 2 | 759 | 356 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 759 | 354 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 2 | 759 | 355 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 759 | 355 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 2 | 738 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 2 | 738 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 2 | 738 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 2 | 738 | 298 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz8_D | 0 | 2 | 738 | 298 | 1018 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY305670 | 416 | 166 | 568 | 0 |
| CX077400 | 289 | 450 | 738 | 0 |
| DN959395 | 292 | 285 | 576 | 0 |
| FC922106 | 278 | 166 | 441 | 0 |
| EY758607 | 277 | 388 | 664 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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