| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g004413m |
| Family | CBM57 |
| Protein Properties | Length: 756 Molecular Weight: 82875.7 Isoelectric Point: 6.2158 |
| Chromosome | Chromosome/Scaffold: 00008 Start: 2135576 End: 2144573 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 278 | 444 | 4e-28 |
| SIKCGGKQMRADNIVYEADNSSLSASSYAVTNTEKWGVSNVGFFYERENPAYVLNTLGQVTGTRTPELYQTSRISPGSLRYYGLGLENGPYNVSLLFAET NILDRSTERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 756 Download |
| MLLSVAHNVF SGSVPRELGN LKELTVLSFG NNNFSGTLPP EIGNLAKLEQ LYLNSWGAGG 60 EIPSTYAKLR NMQTLWASDA PFTGKIPDFI GNWTKLKSLR FQGNSFQGPI PSSLSKLASL 120 DSLRISDIYN VSSSLDFVMS LKNLTDLSLR NALITGSIPS GIGELQNLQT LDLSFNNLTG 180 QIPRTLFNIG SLNYLFLGNN SLSGTLPTQK SENLQNIDLS YNHLSGPFPS WVTSNLQMNL 240 VANNFTFDRS NISVFPGLHC LQRNFPCNRN APRYANFSIK CGGKQMRADN IVYEADNSSL 300 SASSYAVTNT EKWGVSNVGF FYERENPAYV LNTLGQVTGT RTPELYQTSR ISPGSLRYYG 360 LGLENGPYNV SLLFAETNIL DRSTERWESL ARRVFDIYIQ GTLRWKDFDI SKEAGGPNRA 420 IIKNFNATVS ENHLEIHLFW AGKGTCCVPK QGDYGPAISA LSVVSAFKPS VSGLPPSTAG 480 NKNHTGLIVG IAVPLGILGL IAISIVFYMR RKKDNDDEEV LVGIDSKPNT FSYAELRSAT 540 QDFDPSNKLG EGGYGPVYKK TQLMLSNFHG YLAPEYAMRG HLTEKADVFS FGVAALEIIS 600 GRANSDNSLD MEKIYLLEWA WNLHENNQSL GLVDPTLTEF NDKEALRVIG VALLCTQASP 660 MMRPPMSRVV AMLAGDIEVG KVISKPSYLT DWDFKDITAS FLNEDTPTPS SSIKRSNSKE 720 KSERENPVDD HSEGTGALVS PVNVTQLADI IAEGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 5.0e-24 | 2 | 245 | 252 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 1.0e-25 | 3 | 246 | 249 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 1.0e-28 | 2 | 229 | 230 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-29 | 3 | 229 | 229 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-51 | 276 | 461 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39026.1 | 0 | 2 | 561 | 156 | 717 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI39026.1 | 0.0000001 | 96 | 232 | 106 | 244 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI39026.1 | 0 | 548 | 755 | 838 | 1037 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 2 | 561 | 111 | 674 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 548 | 755 | 795 | 994 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 1e-21 | 3 | 230 | 271 | 529 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rj0_A | 2e-17 | 3 | 229 | 492 | 718 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rj0_A | 0.000000000000001 | 3 | 246 | 420 | 714 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rj0_A | 0.000000007 | 1 | 104 | 632 | 734 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
