| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g004533m |
| Family | GH35 |
| Protein Properties | Length: 747 Molecular Weight: 83504.8 Isoelectric Point: 8.7462 |
| Chromosome | Chromosome/Scaffold: 00004 Start: 339429 End: 344440 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 92 | 251 | 7.00005e-41 |
| KIENEYQTIEPAFHEKGPPYVLWAAKMAVDFHTGVPWVMCKQDDAPGPVINACNGMRCGETFKGPNSPNKPSIWTEDWTSFYQVWGGKPYIRSAQDIAFH VALFIAKNGSYVNYYMYHGGTNFGRTAAAFMITGYYDQAPLDEYGLVREPKWGHLKELHA | |||
| GH35 | 1 | 92 | 1.3004e-42 |
| MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVAGIVFRSDNKPYK | |||
| Full Sequence |
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| Protein Sequence Length: 747 Download |
| MWPSLIAKAK EGGLDVIQTY VFWNLHEPQK GQYDFSGRND IIRFIKEIQS QGLYVCLRIG 60 PFIESEWTYG GLPIWLHDVA GIVFRSDNKP YKIENEYQTI EPAFHEKGPP YVLWAAKMAV 120 DFHTGVPWVM CKQDDAPGPV INACNGMRCG ETFKGPNSPN KPSIWTEDWT SFYQVWGGKP 180 YIRSAQDIAF HVALFIAKNG SYVNYYMYHG GTNFGRTAAA FMITGYYDQA PLDEYGLVRE 240 PKWGHLKELH AAIKLCSRPL LTGTQNVISL GQLQEAFVFE ETSGVCAAFL VNNDERKAVT 300 VLFRNISYEL PRKSISILPD CKTVAFNTER VSTQYNKRSK TSNLKFDSDE KWEEYREAIL 360 NFDNTLLRAE GLLDQISAAK DASDYFWYTF RFHYNSSNAQ APLDVQSHGH ILHAFVNGEY 420 TGSAHGSHDN VSFTLRNTVH LRQGTNDGAL LSVTVGLPDS GAFLERKVAG VHRVRVQDKS 480 FTNCSWGYQV GLIGEKLQIY SNLGLNKVLW SSIRSPTRQL TWYKTTFRAP AGNDPIALNL 540 QSMGKGEAWV NGQSIGRYWV SFKTSKGNPS QTQYAVNTVT SIHFCAIIKA TNTYHVPRAF 600 LKPTGNLLVL LEEENGNPLG ITVDTIAIRK VCGHVTNSHL PPLSSWLRHR QRGDTDIKKF 660 GKKPTVQPSC PLGKKISKIV FASFGNPDGD CERYAVGSCH SSHSQGVVER ACIGKSRCSI 720 PLLSRYFGGD PCPGIHKALL VDAQCR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 4.0e-13 | 1 | 77 | 79 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-19 | 669 | 745 | 80 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-115 | 1 | 253 | 296 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 745 | 798 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 1 | 745 | 58 | 816 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 1 | 745 | 38 | 797 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 1 | 745 | 32 | 763 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520337.1 | 0 | 24 | 745 | 60 | 770 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002521778.1 | 0 | 1 | 746 | 54 | 828 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3e-26 | 2 | 249 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-22 | 2 | 240 | 42 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-22 | 2 | 240 | 42 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 3e-22 | 2 | 240 | 42 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 653 | 1 | 604 | 0 |
| HO780602 | 591 | 21 | 562 | 0 |
| HO795552 | 531 | 61 | 542 | 0 |
| HO795552 | 40 | 22 | 61 | 0.0000000000005 |
| HO795552 | 22 | 1 | 22 | 0.0000000000005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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