| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g005404m |
| Family | GH35 |
| Protein Properties | Length: 699 Molecular Weight: 76534.4 Isoelectric Point: 7.9795 |
| Chromosome | Chromosome/Scaffold: 00002 Start: 3324461 End: 3329348 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLW TEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHE | |||
| Full Sequence |
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| Protein Sequence Length: 699 Download |
| MQGFTQKIVQ MMKNEKLFAS QGGPIILSQI ENEYGPESKS LGAAGHAYVN WAAKMAVGLD 60 TGVPWVMCKE DDAPDPVINS CNGFYCDAFS PNKPYKPTLW TEAWSGWFTE FGGAVHRRPV 120 QDLAFAVARF IQKGGSFFNY YMYHGGTNFG RTAGGPFITT SYDYDAPLDE YGLMRQPKYG 180 HLKQLHEAIK LCEYALVSSD PTVTSLGTYQ QAHVFSAGQQ KCAAFLSNYN TKSAARVTFN 240 GRQYNLPPWS ISILPDCKNV VFNTAKVAVQ HTKMQMLPTG SKLLSWETYD EDISSLGESS 300 TLTAIGLLEQ INITRDTSDY LWYMTSVEIS SSESFLRGGQ KPTLTVESAG HAVHVFINGQ 360 FLGSAFGTRE NRRFTFSGPA NLRAGINKIA LLSIAVGLPN VGLHYETWET GVRGAVVLHG 420 LDHGNKDLTW QKWSYQVGLK GEAMNLVSPS EATSVDWTRG SLAAQGQQSL KWYKAYFDAP 480 TGNEPLALDL RSMGKGQVWI NGQSIGRYWM AYAKGDCKTC SYAGTFRPIN CQRRCGHPTQ 540 RWYHVPRSWL KPTKNLLVVF EELGGDASRI SLVKRSVARV CADAHEHHPT TDNNDIENKG 600 NSNSTGNAKV LLQCAPGQSI TSIEFASFGT PSGTCGSFQK GTCHAPNSHA MLEKECIGQE 660 SCSIFISSGV FGTDPCPNVL KRLSVQAVCS TADANTQS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 2.0e-24 | 612 | 689 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-81 | 1 | 189 | 204 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 690 | 691 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK81874.1 | 0 | 1 | 697 | 153 | 850 | putative beta-galactosidase BG1 [Vitis vinifera] |
| EMBL | CAN78072.1 | 0 | 1 | 697 | 153 | 850 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280715.1 | 0 | 1 | 697 | 153 | 850 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306893.1 | 0 | 1 | 697 | 152 | 848 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510455.1 | 0 | 1 | 691 | 152 | 841 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.00000000000001 | 17 | 185 | 146 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00000001 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000001 | 298 | 579 | 342 | 588 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.00000001 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 611 | 1 | 611 | 0 |
| HO780602 | 585 | 1 | 576 | 0 |
| HO795552 | 492 | 1 | 492 | 0 |
| HO796534 | 415 | 197 | 611 | 0 |
| HO800641 | 351 | 207 | 555 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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