| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g005509m |
| Family | GT47 |
| Protein Properties | Length: 694 Molecular Weight: 78421.8 Isoelectric Point: 6.8884 |
| Chromosome | Chromosome/Scaffold: 00387 Start: 9399 End: 15180 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 348 | 667 | 0 |
| KKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGL RSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPA WKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGD GWSGRMEDSILQGCIPVVIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 694 Download |
| MISIEKWRFS WTLVATVASV LTLVSVVHLF LFPLVPSFDY FTARQQIQNS CVPIKESAER 60 VTNRVWENSP PQLNLDHRFP ADLHNAVVYR NAPWKAEIGR WLSGCDSVAK EVDLVEMIGG 120 KSCKSDCSGQ GVCNHELGQC RCFHGFRGKG CSERIHFQCN FPKTPELPYG RWVVSICPTH 180 CDTTRAMCFC GEGTKYPNRP VAEACGFQVN LPSQPGAPKS TDWAKADLDN IFTTNGSKPG 240 WCNVDPEEAY ALKVQFKEEC DCKYDGLLGQ FCEVPVSSTC VNQCSGHGHC RGGFCQCDSG 300 WYGVDCSIPS VMSSMSEWPQ WLRPAHIDIP INANITGNLV NLNAVVKKKR PLLYVYDLPP 360 EFNSLLLEGR HYKLECVNRI YNEKNETLWT DMLYGSQMAF YESILASPHR TLNGEEADFF 420 FVPVLDSCII TRADDAPHLS AQEHRGLRSS LTLEFYKKAY EHIIEHYPYW NRTSGRDHIW 480 FFSWDEGACY APKEIWNSMM LVHWGNTNSK HNHSTTAYWA DNWDRISSSR RGNHSCFDPE 540 KDLVLPAWKA PDAFVLRSKL WASPREKRKT LFYFNGNLGS AYPNGRPESS YSMGVRQKLA 600 EEYGSSPNKE GKLGKQHAED VIVTSLRSEN YHEDLSSSVF CGVLPGDGWS GRMEDSILQG 660 CIPVVIQVVI SSFLLLCQNG SLKIRNKFRI DDS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07974 | EGF_2 | 0.0007 | 282 | 306 | 27 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
| pfam03016 | Exostosin | 4.0e-47 | 347 | 666 | 323 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29877.1 | 0 | 4 | 667 | 33 | 694 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191322.3 | 0 | 1 | 667 | 1 | 664 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | NP_974452.1 | 0 | 1 | 667 | 1 | 662 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277596.1 | 0 | 4 | 667 | 5 | 666 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308967.1 | 0 | 1 | 667 | 1 | 665 | predicted protein [Populus trichocarpa] |
