Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g005782m |
Family | GH3 |
Protein Properties | Length: 678 Molecular Weight: 72439 Isoelectric Point: 8.1412 |
Chromosome | Chromosome/Scaffold: 00001 Start: 4543156 End: 4549877 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 134 | 228 | 8.9e-28 |
VSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDC |
Full Sequence |
---|
Protein Sequence Length: 678 Download |
MASTIAFFFL GLILLSASSS GLAAREPFAC DPKDATTRTL PFCQVSLPIP QRVNDLIGRL 60 SLQEKVKLLI SGAAAVPRLG IKGYEWWSEA LHGVSNVGPG TKFGGDFPGA TSFPQVITTA 120 SSFNATLWEA IGRVSKQDIE DTFDVPFRMC VMEGKVASVM CSYNQVNGVP TCADPNILKR 180 TIRGEWRLNG YIVSDCDSVG VYYDTQHFTS TPEEAAADAI RAGLDLDCGP FLGLHTESAV 240 QRGLLSEIDI NNALVNTLTV QMRLGMFDGE PSSQPYGHLG PKDVCTPDHQ ELALEAARQG 300 IVLLKNQGPS LPLSHIRHRT VAVIGPNSDV TVTMIGNYAG IACGYTTPLQ GIGRYARTIH 360 QQGCKDVACA DDQLFGAAID ASRQADATIL VMGLDQSIEA EALDRAGLLL PGRQQELVSK 420 VSMASKGPTI LVLMSGGPID VAFAKNDPRI AAIIWAGYPG QAGGTAIADI LFGTSNPGGK 480 LPMTWYPQEY ITNLPMTEMA MRPSQSKRYP GRTYRFYKGP VVYPFGHGMS YTNFVHTVAN 540 APTVVAVPLD GRHGSINATI SGKAIKVTHA KCNRLTLGVQ VDVKNVGSKD GAHTLLVFST 600 PPAGHWAPHK QLVAFEKVHV PAGAQQRVGI NIHVCKYLSV VDRSGTRRIP LGEHNIHIGG 660 TKHSVSLHAA TLGVIKS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 8.0e-26 | 134 | 365 | 236 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PLN03080 | PLN03080 | 1.0e-31 | 25 | 133 | 110 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 7.0e-60 | 159 | 632 | 520 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-62 | 301 | 532 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 0 | 122 | 669 | 557 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563659.1 | 0 | 121 | 677 | 210 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 144 | 8 | 145 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270249.1 | 0 | 133 | 677 | 227 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515300.1 | 0 | 23 | 144 | 23 | 144 | Beta-glucosidase, putative [Ricinus communis] |
RefSeq | XP_002515300.1 | 0 | 121 | 677 | 208 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 2e-38 | 146 | 632 | 212 | 696 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3u48_A | 2e-38 | 146 | 632 | 212 | 696 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3u4a_B | 7e-38 | 146 | 632 | 212 | 696 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3u4a_A | 7e-38 | 146 | 632 | 212 | 696 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 2x41_A | 2e-25 | 134 | 667 | 181 | 707 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |