Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g006224m |
Family | GH3 |
Protein Properties | Length: 657 Molecular Weight: 71090.3 Isoelectric Point: 8.4997 |
Chromosome | Chromosome/Scaffold: 00016 Start: 747022 End: 752318 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 20 | 208 | 0 |
YVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDL EDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 657 Download |
MTINLPPFYC SICLDTRQLY VVSDEARAMY NGGMAGLTYW SPNVNIFRDP RWGRGQETPG 60 EDPVLTGKYA ASYVRGLQGN TGSRLKVAAC CKHYTAYDLD NWNGVDRYHF NARVSKQDLE 120 DTYNVPFKAC VVEGKVASVM CSYNQVNGKP TCADPDILKN TIHGQWRLDG YIVSDCDSVG 180 VLYNTQHYTR TPEEAAADAI KAGLDLDCGP FLAIHTEGAV RGGLLREEDV NLALAYTITV 240 QMRLGMFDGE PSAQPFGNLG PRDVCTPAHQ QLALQAAHQG IVLLKNSART LPLSTLRHHT 300 VAVIGPNSDV TVTMIGNYAG VACGYTTPLQ GISRYAKTIH QAGCFGVACN GNQLIGAAEV 360 AARQADATVL VMGLDQSIEA EFIDRAGLLL PGRQQELVSR VAKASRGPVV LVLMCGGPVD 420 VSFAKNDPRI GAILWVGYPG QAGGAAIADV LFGRANPGGK LPMTWYPQDY VSRLPMTDMR 480 MRAARGYPGR TYRFYKGPVV FPFGHGMSYT TFAHTLSKAP NQFSVPIATS LYAFKNTTIS 540 SNAIRVAHTN CNDAMSLGLH VDIKNTGDMA GTHTLLVFAK PPAGNWSPNK QLIGFKKVHV 600 TAGALQSVRL DIHVCKHLSV VDKFGIRRIP MGEHSLHIGD LKHSISLQAN LEGIKF* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-41 | 40 | 344 | 310 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-48 | 25 | 231 | 211 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-62 | 281 | 511 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-73 | 40 | 612 | 633 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 22 | 649 | 647 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF79669.1 | 0 | 21 | 656 | 137 | 774 | beta-D-xylosidase [Pyrus pyrifolia] |
DDBJ | BAG28345.1 | 0 | 21 | 642 | 134 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002311398.1 | 0 | 21 | 651 | 126 | 755 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 21 | 655 | 134 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 21 | 655 | 148 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 40 | 612 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u48_A | 0 | 40 | 612 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u4a_B | 0 | 40 | 612 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u4a_A | 0 | 40 | 612 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2x41_A | 2e-36 | 41 | 651 | 117 | 711 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY263657 | 306 | 153 | 458 | 0 |
FC882636 | 292 | 153 | 444 | 0 |
CF838764 | 285 | 217 | 501 | 0 |
GW867487 | 317 | 134 | 450 | 0 |
DY274096 | 315 | 84 | 398 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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