y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g006399m |
Family | GT47 |
Protein Properties | Length: 648 Molecular Weight: 73770.8 Isoelectric Point: 9.5727 |
Chromosome | Chromosome/Scaffold: 00027 Start: 313705 End: 317136 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 316 | 598 | 0 |
SLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGT DHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGP MPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI |
Full Sequence |
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Protein Sequence Length: 648 Download |
MDIIAKFHGS CRAEIRRLLV ITGMVVAVMV VFQSFSLVTN KGSIVMMVVG NSNTSVVNMS 60 TSTKLDVAVA SDEERLEPDM DRGLMVGVEN YPNHSFYKLK GENSFNKGVT DDKSLNMGYA 120 TSLDNSSTET EAMEIEHGKL EKVEKVGSTY NFDDDPKATA GLELGGVQNR ASPGDFTAEV 180 EKLDVNSTAS ESISAANLSS TADVRQTTET QPMNPKVSKQ PPASIPTNNL SAADISILKR 240 WNRRPTSISK MDLLLLQSRV SSRSMRPSSS SVRDRELLSA KVEIENAPVS WNTPELHASV 300 FRNVSIFKRS YELMESLLKV YIYKEGEKPI FHQPIMRGIY ASEGWFMKLM EGNRKFVVRD 360 PRKAHLFYLP FSSQMLRIAL SEQKLQNHQD LQNYLKTYVK TISRKYRFWN RTGGTDHFVV 420 ACHDWAPKFT GQHLRNCIKA LCNADVSKGF KIGMDTSLPV TYIRSAEAPL DNLGGNPPLK 480 RSTLAFFAGR MHGYLRPILL NFWENKVDDM KIFGPMPHDV EGKRIYREHM KSSKYCICAR 540 GYEVHTPRVV EAIFYECVPV IISDNYVPPF FEVLNWEAFS VFVQEKDIPN LRNILLSIPE 600 ERYLAMQSRV KMVQKHFLWH KKPKKYDIFH MVLHSIWYNR LFNTRTK* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-61 | 314 | 598 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN76867.1 | 0 | 1 | 642 | 1 | 708 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 1 | 644 | 710 | 1391 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 1 | 647 | 1 | 665 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 3 | 647 | 1 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283936.1 | 0 | 246 | 647 | 7 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |