| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g006468m |
| Family | GH35 |
| Protein Properties | Length: 645 Molecular Weight: 70653.6 Isoelectric Point: 7.869 |
| Chromosome | Chromosome/Scaffold: 00002 Start: 3324715 End: 3329348 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 133 | 2.8026e-43 |
| MAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAG GPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHE | |||
| Full Sequence |
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| Protein Sequence Length: 645 Download |
| MAVGLDTGVP WVMCKEDDAP DPVINSCNGF YCDAFSPNKP YKPTLWTEAW SGWFTEFGGA 60 VHRRPVQDLA FAVARFIQKG GSFFNYYMYH GGTNFGRTAG GPFITTSYDY DAPLDEYGLM 120 RQPKYGHLKQ LHEAIKLCEY ALVSSDPTVT SLGTYQQAHV FSAGQQKCAA FLSNYNTKSA 180 ARVTFNGRQY NLPPWSISIL PDCKNVVFNT AKVAVQHTKM QMLPTGSKLL SWETYDEDIS 240 SLGESSTLTA IGLLEQINIT RDTSDYLWYM TSVEISSSES FLRGGQKPTL TVESAGHAVH 300 VFINGQFLGS AFGTRENRRF TFSGPANLRA GINKIALLSI AVGLPNVGLH YETWETGVRG 360 AVVLHGLDHG NKDLTWQKWS YQVGLKGEAM NLVSPSEATS VDWTRGSLAA QGQQSLKWYK 420 AYFDAPTGNE PLALDLRSMG KGQVWINGQS IGRYWMAYAK GDCKTCSYAG TFRPINCQRR 480 CGHPTQRWYH VPRSWLKPTK NLLVVFEELG GDASRISLVK RSVARVCADA HEHHPTTDNN 540 DIENKGNSNS TGNAKVLLQC APGQSITSIE FASFGTPSGT CGSFQKGTCH APNSHAMLEK 600 ECIGQESCSI FISSGVFGTD PCPNVLKRLS VQAVCSTADA NTQS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 3.0e-24 | 558 | 635 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-59 | 1 | 135 | 147 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 636 | 637 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK81874.1 | 0 | 1 | 643 | 207 | 850 | putative beta-galactosidase BG1 [Vitis vinifera] |
| EMBL | CAN78072.1 | 0 | 1 | 643 | 207 | 850 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280715.1 | 0 | 1 | 643 | 207 | 850 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306893.1 | 0 | 1 | 643 | 206 | 848 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510455.1 | 0 | 1 | 637 | 206 | 841 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.00000000005 | 7 | 131 | 186 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00000008 | 43 | 118 | 233 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000002 | 244 | 525 | 342 | 588 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.00000008 | 43 | 118 | 233 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 557 | 1 | 557 | 0 |
| HO780602 | 531 | 1 | 522 | 0 |
| HO796534 | 415 | 143 | 557 | 0 |
| HO800641 | 351 | 153 | 501 | 0 |
| HO800641 | 181 | 10 | 159 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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