| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g006933m |
| Family | GH2 |
| Protein Properties | Length: 626 Molecular Weight: 70508 Isoelectric Point: 6.9548 |
| Chromosome | Chromosome/Scaffold: 00295 Start: 117051 End: 124942 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 2 | 554 | 0 |
| PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPR WYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTP STDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNG LLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKISNTNFFETTQGLEFSWVAHGDGYKLGFGILSLPLIKPHSNYEIELKSSPWYSQWNSCSAEEIFLTVT AKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGG ESSYYSRWRAAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELD | |||
| Full Sequence |
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| Protein Sequence Length: 626 Download |
| MPRLWSAEQP NLYTLVVILK HASGPVVDCE SCLVGIRQVS KAPKQLLVNG NPVVIRGVNR 60 HEHHPRVGKT NIESCMVKDL VLMKQNNINA VRNSHYPQHP RWYELCDLFG LYMIDEANIE 120 THGFYFSEHL KHPTMEPSWA AAMMDRVIGM VERDKNHASI ICWSLGNEAG HGPNHSAAAG 180 WIRGKDPSRL LHYEGGGSRT PSTDIVCPMY MRVWDIVMIA KDPTETRPLI LCEYSHAMGN 240 SNGNIHEYWE AIDSTFGLQG GFIWDWVDQG LLRELADGTK HWAYGGDFGD TPNDLNFCLN 300 GLLWPDRTPH PALHEVKYVY QAIKVSLKKG TLKISNTNFF ETTQGLEFSW VAHGDGYKLG 360 FGILSLPLIK PHSNYEIELK SSPWYSQWNS CSAEEIFLTV TAKLMNSTRW AEAGHVISTA 420 QVQLPSKRER LPHVIRTGDA IILQENLGNT IQLSHQNSWE IKFDIQTGAV ESWKVEGVSV 480 MKRGIFPCFW RAPTDNDKGG GESSYYSRWR AAARADVRWV TFQNKEGIGI YASMYSSSPP 540 MQLNASYYTT TELDRATHNE QLVKEDKIEV HLDHKHMGLG GDDSWTPCVH DKYLVPAVAY 600 SFSIRLSPLT AATSGYGIYK SQMQN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10340 | ebgA | 7.0e-9 | 521 | 612 | 92 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 2.0e-13 | 542 | 608 | 67 | + beta-D-galactosidase; Reviewed | ||
| pfam02836 | Glyco_hydro_2_C | 5.0e-114 | 43 | 324 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 3.0e-137 | 2 | 498 | 501 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 2 | 499 | 514 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002299206.1 | 0 | 1 | 512 | 354 | 865 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299206.1 | 0 | 510 | 625 | 995 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 2 | 525 | 355 | 875 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 521 | 355 | 873 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002513059.1 | 0 | 314 | 625 | 785 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1f4h_D | 0 | 2 | 513 | 296 | 812 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1f4h_D | 0.00006 | 541 | 604 | 953 | 1016 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1f4h_C | 0 | 2 | 513 | 296 | 812 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1f4h_C | 0.00006 | 541 | 604 | 953 | 1016 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1f4h_B | 0 | 2 | 513 | 296 | 812 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY305670 | 337 | 166 | 502 | 0 |
| FC922106 | 278 | 166 | 443 | 0 |
| EY723441 | 287 | 77 | 363 | 0 |
| EY819313 | 273 | 1 | 273 | 0 |
| EY819313 | 25 | 264 | 288 | 0.43 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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