| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g007038m |
| Family | GH2 |
| Protein Properties | Length: 621 Molecular Weight: 69816.5 Isoelectric Point: 6.8344 |
| Chromosome | Chromosome/Scaffold: 00295 Start: 117051 End: 124942 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 2 | 334 | 0 |
| PRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPR WYELCDLFGLYMIDEANIETHGFYFSEHLKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYEGGGSRTP STDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPNDLNFCLNG LLWPDRTPHPALHEVKYVYQAIKVSLKKGTLKV | |||
| Full Sequence |
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| Protein Sequence Length: 621 Download |
| MPRLWSAEQP NLYTLVVILK HASGPVVDCE SCLVGIRQVS KAPKQLLVNG NPVVIRGVNR 60 HEHHPRVGKT NIESCMVKDL VLMKQNNINA VRNSHYPQHP RWYELCDLFG LYMIDEANIE 120 THGFYFSEHL KHPTMEPSWA AAMMDRVIGM VERDKNHASI ICWSLGNEAG HGPNHSAAAG 180 WIRGKDPSRL LHYEGGGSRT PSTDIVCPMY MRVWDIVMIA KDPTETRPLI LCEYSHAMGN 240 SNGNIHEYWE AIDSTFGLQG GFIWDWVDQG LLRELADGTK HWAYGGDFGD TPNDLNFCLN 300 GLLWPDRTPH PALHEVKYVY QAIKVSLKKG TLKVEGVSVM KRGIFPCFWR APTDNDKGGG 360 ESSYYSRWRA AGIDSLVFLT KSCSIQNVTD YFVKIRVVYD GTPRVDMSSL TKLEKAKALF 420 EIVIDYTIYG SGNVIVECNF KPNTSDLPPL PRVGVEFHLE QSMDKIKFYG RGPFECYPDR 480 KAAAHVDVYE QIVGDMHVPY IVPGECAARA DVRWVTFQNK EGIGIYASMY SSSPPMQLNA 540 SYYTTTELDR ATHNEQLVKE DKIEVHLDHK HMGLGGDDSW TPCVHDKYLV PAVAYSFSIR 600 LSPLTAATSG YGIYKSQMQN * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10340 | ebgA | 7.0e-38 | 324 | 607 | 287 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 4.0e-43 | 348 | 603 | 262 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 5.0e-110 | 2 | 335 | 337 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam02836 | Glyco_hydro_2_C | 8.0e-114 | 43 | 324 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK09525 | lacZ | 3.0e-171 | 2 | 331 | 341 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002299206.1 | 0 | 1 | 421 | 354 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299206.1 | 0 | 307 | 620 | 805 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 2 | 334 | 355 | 687 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 334 | 355 | 687 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002513059.1 | 0 | 317 | 620 | 807 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jz2_D | 0 | 2 | 334 | 298 | 638 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1jz2_D | 5e-24 | 348 | 599 | 784 | 1018 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1jz2_C | 0 | 2 | 334 | 298 | 638 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1jz2_C | 5e-24 | 348 | 599 | 784 | 1018 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| PDB | 1jz2_B | 0 | 2 | 334 | 298 | 638 | A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With Allolactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX077400 | 280 | 323 | 599 | 0 |
| EY819313 | 273 | 1 | 273 | 0 |
| CX664992 | 262 | 360 | 621 | 0 |
| EY723441 | 258 | 77 | 334 | 0 |
| EY819313 | 25 | 264 | 288 | 0.39 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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