Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g007089m |
Family | GH3 |
Protein Properties | Length: 619 Molecular Weight: 66857.4 Isoelectric Point: 8.9341 |
Chromosome | Chromosome/Scaffold: 00016 Start: 747022 End: 752681 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 8 | 175 | 0 |
GLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGK VASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAA |
Full Sequence |
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Protein Sequence Length: 619 Download |
MYNGGMAGLT YWSPNVNIFR DPRWGRGQET PGEDPVLTGK YAASYVRGLQ GNTGSRLKVA 60 ACCKHYTAYD LDNWNGVDRY HFNARVSKQD LEDTYNVPFK ACVVEGKVAS VMCSYNQVNG 120 KPTCADPDIL KNTIHGQWRL DGYIVSDCDS VGVLYNTQHY TRTPEEAAAD AIKAAIHTEG 180 AVRGGLLREE DVNLALAYTI TVQMRLGMFD GEPSAQPFGN LGPRDVCTPA HQQLALQAAH 240 QGIVLLKNSA RTLPLSTLRH HTVAVIGPNS DVTVTMIGNY AGVACGYTTP LQGISRYAKT 300 IHQAGCFGVA CNGNQLIGAA EVAARQADAT VLVMGLDQSI EAEFIDRAGL LLPGRQQELV 360 SRVAKASRGP VVLVLMCGGP VDVSFAKNDP RIGAILWVGY PGQAGGAAIA DVLFGRANPG 420 GKLPMTWYPQ DYVSRLPMTD MRMRAARGYP GRTYRFYKGP VVFPFGHGMS YTTFAHTLSK 480 APNQFSVPIA TSLYAFKNTT ISSNAIRVAH TNCNDAMSLG LHVDIKNTGD MAGTHTLLVF 540 AKPPAGNWSP NKQLIGFKKV HVTAGALQSV RLDIHVCKHL SVVDKFGIRR IPMGEHSLHI 600 GDLKHSISLQ ANLEGIKF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 6.0e-34 | 12 | 306 | 306 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-40 | 11 | 152 | 142 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-62 | 243 | 473 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-67 | 12 | 574 | 631 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 611 | 640 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF79669.1 | 0 | 1 | 618 | 145 | 774 | beta-D-xylosidase [Pyrus pyrifolia] |
DDBJ | BAG28345.1 | 0 | 1 | 604 | 142 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002311398.1 | 0 | 1 | 613 | 134 | 755 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 1 | 617 | 142 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 1 | 617 | 156 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 12 | 574 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u48_A | 0 | 12 | 574 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u4a_B | 0 | 12 | 574 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3u4a_A | 0 | 12 | 574 | 128 | 696 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2x41_A | 1e-35 | 13 | 613 | 117 | 711 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF838764 | 285 | 179 | 463 | 0 |
DY263657 | 306 | 125 | 420 | 0 |
FC882636 | 292 | 125 | 406 | 0 |
DY291330 | 346 | 266 | 609 | 0 |
CF838422 | 252 | 187 | 438 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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