| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g007110m |
| Family | GH35 |
| Protein Properties | Length: 619 Molecular Weight: 68352.8 Isoelectric Point: 8.4466 |
| Chromosome | Chromosome/Scaffold: 00032 Start: 895627 End: 900307 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 22 | 116 | 4.3e-39 |
| KAYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 619 Download |
| MFYIQQINTC NGFYCDYFSP NKAYKPKMWT EAWTGWYTEF GGPVPHRPVE DLAFSVAKFI 60 QKGGSFINYY MYHGGTNFGR TAGGPFIATS YDYDAPLDEY GLLRQPKWGH LKDLHRAIKL 120 CEPALVSGNP TVMPLGNYQE AHVFKSKSAC AAFLANYNQR TFAKVAFGNQ HYNLPPWSIS 180 ILPDCKNTVY NTARVGHQST QMKMTPVPIH GGFSWQAFNE VPSAYGDSSF TMSGLLEQIN 240 TTRDATDYLW YMTDVKIDPS EGFLRSGNYP VLTVMSAGHA LHVFVNGQLA GTAYGSLEFP 300 KLTFTEGVNM RAGINKIALL SIAVGLPNVG PHFETWNAGV LGPVTLNGLN EGRRDLSWQK 360 WTYKIGLEGE KLNLHSLSGG SSVEWAEGSL VAQRQPLTWY RTTFSAPAGN APLALDMGSM 420 GKGQVWVNGQ SIGRHWPAYK ASGSCGYCSY TGTYTEKKCL SNCGEASQRW YHVPRSWLKP 480 TGNLLVVFEE WGGNPNGISL VRREIDSVCA YMYEWQPTLI NWQLHASGKV NKPLRPKAHL 540 MCGPGQKIKS IKFASFGTPE GVCGSYRQGS CHAFHSYDAF QRLCVGQNMC TVTVAPEMFG 600 GDPCPSIMKQ LAVEAICG* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 4.0e-19 | 542 | 617 | 80 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-49 | 7 | 118 | 123 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 7 | 617 | 612 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 7 | 617 | 234 | 845 | unknown [Populus trichocarpa x Populus deltoides] |
| EMBL | CAC44500.1 | 0 | 7 | 617 | 231 | 842 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 7 | 617 | 227 | 838 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329051.1 | 0 | 7 | 617 | 218 | 829 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 7 | 617 | 233 | 844 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4e8d_B | 0.000000004 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00007 | 248 | 503 | 385 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000004 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.00007 | 248 | 503 | 385 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 0.000000004 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO780602 | 510 | 7 | 503 | 0 |
| HO778160 | 504 | 7 | 507 | 0 |
| HO795552 | 414 | 7 | 419 | 0 |
| GW868956 | 316 | 199 | 514 | 0 |
| GW866309 | 317 | 176 | 487 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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