| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g008072m |
| Family | CBM57 |
| Protein Properties | Length: 580 Molecular Weight: 63114.3 Isoelectric Point: 8.9189 |
| Chromosome | Chromosome/Scaffold: 00051 Start: 515916 End: 520660 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 331 | 499 | 1.8e-31 |
| SIKCGGTQIASASGIEFDDDSKTLEAASFYTSSGNRWAVSNTGNFISNPNGPLYIAQTDSQITGTLDSELYKTARISPSSLRYYGLGLENGKYRIDLHFA EITMEDSLSWKGLGRRVFDVYIQGERVLRDLNIKKEAGGSKRALVKTFEANVTNTIIEIHFFWAGKGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MPHGHLKMRI LVLLVTLPSE LFMLRKLMDL NLGQNVLNGS IPAEIGQLSN MQYLSLGINN 60 FTGRVPTELG NLTKLISLSF SSNNFFGPLP KELGKLTSLQ QLYIDSSGVT GSIPQEFANL 120 KSLRILWASD NLFTGKIPEF FGTLTELADL RLQGTLLEGP IPRSFRALNK LEDLRIGDLS 180 AEDSTLDFLE SQKSLSILSL RNCRVSGKIP DQLGTFAKLQ LLDLSFNKLT GQIPTSLQDL 240 STLQYLYLGN NNLSGELPVN IIAPNLIALD VSYNPLSGNL PRNFAKGGLS MNVIGSSINA 300 NNLQDGKALG MMQCLHSNTK CSNKVPSSSF SIKCGGTQIA SASGIEFDDD SKTLEAASFY 360 TSSGNRWAVS NTGNFISNPN GPLYIAQTDS QITGTLDSEL YKTARISPSS LRYYGLGLEN 420 GKYRIDLHFA EITMEDSLSW KGLGRRVFDV YIQGERVLRD LNIKKEAGGS KRALVKTFEA 480 NVTNTIIEIH FFWAGKGTCC IPFQGTYGPL VSAIHASQVS TGNGSSKGDK KHVGKIVGIT 540 VGCAAALVII SSVFYLWWTK DSSSHIRIFT DSPKQNLVR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 3.0e-36 | 17 | 286 | 273 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-36 | 17 | 280 | 265 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-39 | 17 | 304 | 292 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-39 | 27 | 285 | 260 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 4.0e-58 | 329 | 514 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21051.1 | 0 | 5 | 575 | 78 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282711.1 | 0 | 5 | 575 | 234 | 791 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324865.1 | 0 | 5 | 574 | 79 | 593 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515504.1 | 0 | 5 | 575 | 324 | 894 | ATP binding protein, putative [Ricinus communis] |
| RefSeq | XP_002515504.1 | 0.000000006 | 127 | 305 | 302 | 492 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 5e-26 | 16 | 258 | 430 | 718 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3rj0_A | 9e-25 | 27 | 268 | 293 | 568 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3rj0_A | 1e-19 | 27 | 291 | 393 | 702 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3rj0_A | 1e-18 | 30 | 281 | 249 | 480 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3rj0_A | 3e-18 | 6 | 282 | 337 | 647 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
