Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g008154m |
Family | GT5 |
Protein Properties | Length: 577 Molecular Weight: 64480.5 Isoelectric Point: 6.065 |
Chromosome | Chromosome/Scaffold: 00127 Start: 96888 End: 103441 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 67 | 566 | 0 |
NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNP YGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYG ALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE |
Full Sequence |
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Protein Sequence Length: 577 Download |
MKKTRISPGI YWVKKRTVLV WLSVFTLFLL RVYHEVIDSS KDIDGYGVKK IEDVEGEDKA 60 QTRVSYNIVF VTAEAAPYSK TGGLGDVCGS LPVALAARGH RVMVVSPRYF NGTAADENFT 120 LAKDLGCCMK ICCFGGEQEI AFFHEYREGV DWVFVDHPSY HRPGNPYGDI NGAFGDNQFR 180 YTLLCYAACE APLVLPLGGF TYGEKCIFLV NDWHAGLVPV LLASKYRPHG VYKDARSILV 240 IHNLSHQGVE PAATYKNLGL PSEWYGALEW VFPTWARTHA LDTGEAVNVL KGAIVTADRL 300 LTVSKGYSWE ITTVEGGYGL HEILSSRKSV LNGITNGIDI TEWNPSSDEH IASHYSIDDL 360 SGKVQCKIAL QKELGLPIRP DCPLIGFIGR LDYQKGIDLI RLAAPEILAD DIQFVMLGSG 420 DPQFESWMRD TEATYKDKYR GWVGFNVPIS HRITAGCDIL LMPSRFEPCG LNQLYAMRYG 480 TIPVVHATGG LRDTVENFNP FAREGSGEGT GWSFLPLSEE SMLTALRFAI RTYREHKSSW 540 EGLMRRGMEK DYTWENAAIQ YEQVFEWASI DPPYIH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 4.0e-107 | 71 | 565 | 505 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 7.0e-142 | 67 | 574 | 513 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 3.0e-175 | 67 | 566 | 505 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 67 | 567 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 67 | 566 | 503 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 37 | 575 | 94 | 632 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 29 | 574 | 100 | 644 | starch synthase I precursor [Phaseolus vulgaris] |
EMBL | CBI23015.1 | 0 | 36 | 575 | 28 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277372.1 | 0 | 36 | 575 | 93 | 632 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321996.1 | 0 | 30 | 576 | 103 | 649 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 67 | 565 | 11 | 508 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3vue_A | 0 | 67 | 565 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 67 | 565 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 67 | 565 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 67 | 565 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 492 | 83 | 574 | 0 |
HO581986 | 368 | 176 | 542 | 0 |
GO872237 | 347 | 227 | 573 | 0 |
GO842198 | 336 | 90 | 425 | 0 |
HO581986 | 34 | 541 | 574 | 0.00004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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