| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g008369m |
| Family | GT1 |
| Protein Properties | Length: 569 Molecular Weight: 63044.7 Isoelectric Point: 7.0693 |
| Chromosome | Chromosome/Scaffold: 00119 Start: 165414 End: 172740 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 130 | 536 | 0 |
| VGTRGDVQPFVAIGKRLQEDGHRVRLATHANFKDFVLGAGLEFFPLGGDPKILAGYMVKNKGFLPSGPSEIPIQRNQLKEIIYSLLPACKDPDPDTMVPF KPDAIIANPPAYGHTHVAESLKVPLHIIFTMPWTPTSEFPHPLSRVKQPVAYRLSYQIVDALIWLGIRDMINDFRKKRLNLRRVTYLSGSYSSPLDVPYA YIWSPHLVPKPKDWGPKIDVVGFCFLDLASTYEPPDSLVKWLEDGEKPIYIGFGSLPVEEPEKMTEIIVKALEITGHRGIINKGWGGLGNLAESKDFVYL LDNCPHDWLFSRCLAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGLGPAPIPVEEFSLDKLVDAIRFMLDPKVKEHAVELAKAMENEDGV TGAVKAF | |||
| Full Sequence |
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| Protein Sequence Length: 569 Download |
| MEKSQKHYSI GVGKAKRQIL LPDRYAFGDS ISLTMSVVYT ISLGTIRSCY NDSQATNTTM 60 LIVVQLKWLN RLATVKDDGT VQFEVPADIK PQNLDFGTGV VYTDDSTDQE PIEAADVHGI 120 PPLHIVMLIV GTRGDVQPFV AIGKRLQEDG HRVRLATHAN FKDFVLGAGL EFFPLGGDPK 180 ILAGYMVKNK GFLPSGPSEI PIQRNQLKEI IYSLLPACKD PDPDTMVPFK PDAIIANPPA 240 YGHTHVAESL KVPLHIIFTM PWTPTSEFPH PLSRVKQPVA YRLSYQIVDA LIWLGIRDMI 300 NDFRKKRLNL RRVTYLSGSY SSPLDVPYAY IWSPHLVPKP KDWGPKIDVV GFCFLDLAST 360 YEPPDSLVKW LEDGEKPIYI GFGSLPVEEP EKMTEIIVKA LEITGHRGII NKGWGGLGNL 420 AESKDFVYLL DNCPHDWLFS RCLAVVHHGG AGTTAAGLKA ACPTTIVPFF GDQPFWGERV 480 HARGLGPAPI PVEEFSLDKL VDAIRFMLDP KVKEHAVELA KAMENEDGVT GAVKAFYKHF 540 PGKKSESEPE LPHSHRGLLS IRRCFGHT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03033 | Glyco_transf_28 | 5.0e-33 | 125 | 269 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 3.0e-33 | 124 | 534 | 422 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 8.0e-121 | 124 | 539 | 420 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 53 | 566 | 92 | 600 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 49 | 566 | 98 | 613 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 49 | 566 | 145 | 660 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512608.1 | 0 | 65 | 566 | 94 | 594 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 53 | 566 | 112 | 624 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 6e-29 | 123 | 545 | 1 | 386 | A Chain A, Nmr Structure Of A Cdc25-Like Dual-Specificity Tyrosine Phosphatase Of Arabidopsis Thaliana |
| PDB | 3h4i_A | 6e-29 | 123 | 545 | 1 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 9e-20 | 123 | 528 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 9e-20 | 123 | 528 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 4e-19 | 367 | 532 | 230 | 391 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 132 | 466 | 0 |
| GO883166 | 335 | 84 | 418 | 0 |
| EH765453 | 283 | 131 | 413 | 0 |
| DV466557 | 287 | 242 | 528 | 0 |
| GT046352 | 32 | 459 | 490 | 0.0003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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