y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g009162m |
Family | GH14 |
Protein Properties | Length: 542 Molecular Weight: 61260.8 Isoelectric Point: 8.7066 |
Chromosome | Chromosome/Scaffold: 00009 Start: 1766672 End: 1770096 |
Description | beta-amylase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 79 | 500 | 0 |
FVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEE IDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKY MLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHP SELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKP SFSFNFLRMDKNMFEYHNWVRF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MAIATFAPSF CCTRTEPTQL PRFRLTHSHK LQSQTRRLSV SCRLNSSNSL SPADNNNNNR 60 YKLHDGASSQ GRRNGSPVFV KLPEDSTMIG GKVKRRKAMA QSFKALAAAG VEGVVVEVWW 120 GVVERDRPGV YDWRGYFDLI VLASNCGLKV RALLAFHQCG SGPGDPKWVP LPQWVLEEID 180 KDPDLAYSDR FGRRNMEYIS LGCDILPVLR GRSPIQAYTD FMRNFRDTFR PLLGAIITGV 240 QVGMGPAGEL RYPSLPSQKL MWSWRSRELG EFQCYDKYML ASLNACAREI GMREWGDGGP 300 IGASNLMQDP EHTEFFRTDN GLWNTAYGNF FLEWYSGMLL LHGERICREA ETIFRGTRVN 360 TSAKVGGIHW HYGTPSHPSE LTAGYYNTST RDGFLPIARI FGRYGFTLCC SCFEMRDVDE 420 KQMNPFSSPE GFLRQLLLAA RICEIPLEGE NSATSLDDAA FQQVIKMSKF YSEGLEKPSF 480 SFNFLRMDKN MFEYHNWVRF TRFVRQLSGS SIFRAKLDFR GDIRPSSASD FAKVGLAFAY 540 C* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-89 | 128 | 512 | 388 | + beta-amylase | ||
PLN02161 | PLN02161 | 6.0e-95 | 77 | 508 | 442 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-111 | 128 | 507 | 387 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-170 | 38 | 507 | 472 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-172 | 62 | 508 | 449 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65860.1 | 0 | 2 | 540 | 7 | 542 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263816.1 | 0 | 37 | 540 | 133 | 631 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297961.1 | 0 | 1 | 541 | 1 | 555 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304568.1 | 0 | 72 | 508 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454872.1 | 0 | 99 | 520 | 1 | 420 | hypothetical protein SORBIDRAFT_03g000480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 78 | 507 | 15 | 443 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 78 | 510 | 8 | 438 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 78 | 510 | 12 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 78 | 510 | 12 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 78 | 510 | 12 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY276904 | 374 | 1 | 368 | 0 |
DY263387 | 354 | 1 | 348 | 0 |
DY286654 | 294 | 1 | 294 | 0 |
FC911946 | 281 | 1 | 281 | 0 |
DY286654 | 34 | 298 | 331 | 0.027 |
Sequence Alignments (This image is cropped. Click for full image.) |
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