| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g009560m |
| Family | GH5 |
| Protein Properties | Length: 533 Molecular Weight: 59747.4 Isoelectric Point: 4.8366 |
| Chromosome | Chromosome/Scaffold: 00059 Start: 426258 End: 430723 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 204 | 501 | 0 |
| QLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHY YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 533 Download |
| MDIVFSKWVF AFSLSCCLIF SIAPSVEGLH GNSKVRGVNL GGWLVIEGWI KPSLFDGILN 60 GDMLDGTQVQ IKSVTLEKYV CAESGGGTDV SVTRDVASSW ETFTLWRVSE SEFQFRTSQG 120 QFLTCDGEGC VVSATAKSPS TPETFEIERN NDSRVHIKLK SGTYLQATLG NQLTSDYPGM 180 PGWDDNAATF EMAIVANNLH GDYQLANGYG HERAKEVLKR HRNTFITIED FNFLYRHGIN 240 TVRIPVGWWI AFDPDPPAPF IGGSLEALDN ALSWAEAYNI KCIIDLHAAP GSQNGMEHSA 300 SRDGTTDWPA SDYISQTLDV IDFLASRYAK HPALLGIELL NEPSAATVPL DILVPYYKQG 360 YQIVRKYSPT AYVIVCQRIG NADPLELYQA NIGLHNIVVD LHYYNLFDTF FVNMSTVDNI 420 LFIYKSREAQ LQALNNANGP LVFIGEWVNE WNVTSGTQKD YQDFGSAQLE VYNAASFGWA 480 YWTLKNDRKH WDFEWNIRNN YLQLGNSPNM QIFNSLVLLG IIFAWLYLHH IL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06268 | Fascin | 0.0003 | 78 | 148 | 71 | + Fascin domain. This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven. Members of this family are histidine rich, typically contain the repeated motif of HHXH. | ||
| cd00257 | Fascin | 4.0e-5 | 115 | 181 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 5.0e-12 | 67 | 176 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 3.0e-22 | 223 | 487 | 271 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 7.0e-23 | 198 | 503 | 340 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 1 | 532 | 60 | 592 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 1 | 532 | 48 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 35 | 505 | 1 | 474 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 9 | 521 | 11 | 528 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 17 | 532 | 4 | 515 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-29 | 202 | 420 | 45 | 265 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqp_A | 0.002 | 32 | 114 | 6 | 75 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 2e-29 | 202 | 420 | 50 | 270 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 3n9k_A | 0.003 | 32 | 69 | 11 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 2pc8_A | 3e-29 | 202 | 420 | 51 | 271 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
