Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g009873m |
Family | AA3 |
Protein Properties | Length: 524 Molecular Weight: 57272.4 Isoelectric Point: 6.9883 |
Chromosome | Chromosome/Scaffold: 00003 Start: 3055304 End: 3057522 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 51 | 514 | 0 |
GKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGGSPFGNPLVTDKRFFGFSLLQTDEYTSVAQSFISTDGVQNHRGRVLGGSSAINGGFYSRAREDFVK KAGWDEELVKKAYEWVESKVVFPPELTPWQSVVEFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSADLLEAGNPKNLVVLLNATVNNIIFSNN GKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQEVGEGMQDNPCIAKLVDTMPQKRL PEPPEVVAGVLPISSNASRMPIAAKLAFPISKGKLELDSTDPRQNPSIKFNYLAKEKDLHECVKMVQLLDKVTKSQSVSSFLGIKPQEKLMSNSDELRKL CKNNVRTFYHYHGGCIVGSVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKL |
Full Sequence |
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Protein Sequence Length: 524 Download |
MKFPDTFHSH ELLIAFSFFL LTLPLFSSSL PEGKGKEVPY YMTSDVKEVA GKSFDYIVVG 60 GGTTGCPLAA TLSDNFSVLL VERGGSPFGN PLVTDKRFFG FSLLQTDEYT SVAQSFISTD 120 GVQNHRGRVL GGSSAINGGF YSRAREDFVK KAGWDEELVK KAYEWVESKV VFPPELTPWQ 180 SVVEFGLLEA GILPYNGYSL EHIEGTKIGG TAFDQCGKRH TSADLLEAGN PKNLVVLLNA 240 TVNNIIFSNN GKANESRAHG IRFIKSDGSS NHMHEAYLNK PGNSSTWGDV ILSAGALGSP 300 QLLLLSGIGP HDHLKDLNIP TIVDLQEVGE GMQDNPCIAK LVDTMPQKRL PEPPEVVAGV 360 LPISSNASRM PIAAKLAFPI SKGKLELDST DPRQNPSIKF NYLAKEKDLH ECVKMVQLLD 420 KVTKSQSVSS FLGIKPQEKL MSNSDELRKL CKNNVRTFYH YHGGCIVGSV VDKDYRVYGV 480 KGLRVIDGST FQESPGTNPM ATVMMLGRYQ GVKLVEERRE ICN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 3.0e-28 | 52 | 334 | 333 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 4.0e-31 | 379 | 507 | 136 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
TIGR03970 | Rv0697 | 1.0e-36 | 55 | 507 | 514 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 9.0e-48 | 47 | 508 | 565 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 2.0e-161 | 53 | 518 | 546 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_172871.1 | 0 | 41 | 520 | 3 | 485 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | XP_002312249.1 | 0 | 42 | 520 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 35 | 517 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315048.1 | 0 | 1 | 520 | 1 | 528 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522448.1 | 0 | 1 | 518 | 1 | 525 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 53 | 518 | 26 | 517 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gdp_A | 0 | 53 | 518 | 26 | 517 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gdn_B | 0 | 53 | 518 | 26 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 53 | 518 | 26 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 53 | 518 | 26 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |