Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010408m |
Family | GH3 |
Protein Properties | Length: 512 Molecular Weight: 55479.4 Isoelectric Point: 9.1184 |
Chromosome | Chromosome/Scaffold: 00016 Start: 747022 End: 752681 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 8 | 176 | 0 |
GLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGK VASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGV |
Full Sequence |
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Protein Sequence Length: 512 Download |
MYNGGMAGLT YWSPNVNIFR DPRWGRGQET PGEDPVLTGK YAASYVRGLQ GNTGSRLKVA 60 ACCKHYTAYD LDNWNGVDRY HFNARVSKQD LEDTYNVPFK ACVVEGKVAS VMCSYNQVNG 120 KPTCADPDIL KNTIHGQWRL DGYIVSDCDS VGVLYNTQHY TRTPEEAAAD AIKAGVACGY 180 TTPLQGISRY AKTIHQAGCF GVACNGNQLI GAAEVAARQA DATVLVMGLD QSIEAEFIDR 240 AGLLLPGRQQ ELVSRVAKAS RGPVVLVLMC GGPVDVSFAK NDPRIGAILW VGYPGQAGGA 300 AIADVLFGRA NPGGKLPMTW YPQDYVSRLP MTDMRMRAAR GYPGRTYRFY KGPVVFPFGH 360 GMSYTTFAHT LSKAPNQFSV PIATSLYAFK NTTISSNAIR VAHTNCNDAM SLGLHVDIKN 420 TGDMAGTHTL LVFAKPPAGN WSPNKQLIGF KKVHVTAGAL QSVRLDIHVC KHLSVVDKFG 480 IRRIPMGEHS LHIGDLKHSI SLQANLEGIK F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 7.0e-34 | 207 | 467 | 270 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 6.0e-45 | 11 | 176 | 166 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-49 | 174 | 366 | 199 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 2.0e-80 | 1 | 179 | 190 | + Probable beta-xylosidase; Provisional | ||
PLN03080 | PLN03080 | 3.0e-111 | 175 | 504 | 340 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96385.1 | 0 | 174 | 510 | 6 | 342 | unknown [Populus trichocarpa x Populus deltoides] |
DDBJ | BAG28345.1 | 0 | 1 | 176 | 142 | 317 | arabinofuranosidase [Citrus unshiu] |
DDBJ | BAG28345.1 | 0 | 174 | 497 | 432 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002316021.1 | 0 | 1 | 176 | 142 | 317 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 174 | 510 | 431 | 767 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ac0_D | 1e-26 | 196 | 494 | 551 | 822 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
PDB | 3ac0_D | 5e-16 | 14 | 147 | 101 | 225 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
PDB | 3ac0_C | 1e-26 | 196 | 494 | 551 | 822 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
PDB | 3ac0_C | 5e-16 | 14 | 147 | 101 | 225 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
PDB | 3ac0_B | 1e-26 | 196 | 494 | 551 | 822 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO107510 | 301 | 191 | 489 | 0 |
DY291330 | 331 | 174 | 502 | 0 |
DT753580 | 298 | 176 | 471 | 0 |
CO132536 | 279 | 236 | 512 | 0 |
ES823938 | 322 | 190 | 509 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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