| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g010789m |
| Family | CBM43 |
| Protein Properties | Length: 502 Molecular Weight: 54537 Isoelectric Point: 6.6614 |
| Chromosome | Chromosome/Scaffold: 00025 Start: 61075 End: 63436 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 383 | 464 | 1.8e-24 |
| WCVMSPSASLDDPQVAASVSYACGNADCTSLGYGTSCGNLDSRGNISYAFNSYYQINNQLDSACRFPNLSAVTTTNPSTGDC | |||
| GH17 | 44 | 362 | 0 |
| IGVNWGTQATHPLPPSTVVRMLKDNGIDRVKLFDADSKYLNALANSGIQVMVGIPNEMLSTLASSVQAAENWVAKNVSSHVSSNGVDIRYVAVGNEPFLP TFNGTFIGTTLPALQNIQAALIKAGLGTRIKVTVPLNADVYQSQSNLPSEGDFRTDIHDLMLQILKFLSDNGGPFTVNIYPFISLYNDPSFPIDFAFFDS NSSPINDNGRVYENVFDANYDTLVWALQKNGFGNLSIIVGEIGWPTDGDKNANLKFAQRFNQGFMSRVNAGKGTPMRSGAIDAYLFSLIDEDAKSIQPGN FERHWGLLYFDGQPKYQLS | |||
| Full Sequence |
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| Protein Sequence Length: 502 Download |
| MRSMGSLKQG VVSRRKLLVG LLLLFYFYGG VLLIMDCVVV VSGIGVNWGT QATHPLPPST 60 VVRMLKDNGI DRVKLFDADS KYLNALANSG IQVMVGIPNE MLSTLASSVQ AAENWVAKNV 120 SSHVSSNGVD IRYVAVGNEP FLPTFNGTFI GTTLPALQNI QAALIKAGLG TRIKVTVPLN 180 ADVYQSQSNL PSEGDFRTDI HDLMLQILKF LSDNGGPFTV NIYPFISLYN DPSFPIDFAF 240 FDSNSSPIND NGRVYENVFD ANYDTLVWAL QKNGFGNLSI IVGEIGWPTD GDKNANLKFA 300 QRFNQGFMSR VNAGKGTPMR SGAIDAYLFS LIDEDAKSIQ PGNFERHWGL LYFDGQPKYQ 360 LSLGNGRNGL VAAKDVHYLA QKWCVMSPSA SLDDPQVAAS VSYACGNADC TSLGYGTSCG 420 NLDSRGNISY AFNSYYQINN QLDSACRFPN LSAVTTTNPS TGDCLFRIMI KTDTTAGAGE 480 RRLSRSVGLQ AYILTFVFII M* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0005 | 276 | 354 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-15 | 382 | 448 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-29 | 382 | 466 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-76 | 44 | 362 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 28 | 501 | 8 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_194843.1 | 0 | 17 | 501 | 2 | 484 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002324127.1 | 0 | 41 | 486 | 38 | 488 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330836.1 | 0 | 4 | 496 | 1 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 39 | 498 | 24 | 485 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 44 | 363 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 44 | 363 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 44 | 363 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 44 | 363 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 44 | 363 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
