| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g010819m |
| Family | CBM57 |
| Protein Properties | Length: 501 Molecular Weight: 55019.7 Isoelectric Point: 5.1065 |
| Chromosome | Chromosome/Scaffold: 00019 Start: 604809 End: 612697 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 218 | 361 | 1.9e-21 |
| DADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNV TRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISG | |||
| Full Sequence |
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| Protein Sequence Length: 501 Download |
| MSLLSPSSFF FLSLLLVLPL SLASSYPYKA SYRIDCGSAT STTDPFNTTW QADDRYYTSG 60 ATSIVSEPLH FRFPHEKTLR YFPPSSGKKN CYIIPNLPPG RYYIRTFTVY DNYDGKSHSP 120 SFDVSVEGTL VFSWRSPWPE GLARDGAYSD LFAFVKDGEL DLCFYSFATD PPVIASLEVQ 180 QIDPLSYDAA TIGNNHILVN YGRLTSGSNQ WGPGFSNDAD DFGRSWQSDA ASRSPNAKSS 240 IKSVTTRERI TNTNQPPNYY PMKLYQTAIV SSGAIQYNLA VDAKLDYLIW FHFAEIDSSV 300 TKAGQRVFDI LVNDKNVTRV DIFNSVGSFA AYSWHYVAKN LSSTELTVKL VPVVGAALIS 360 GLENYALVPN DLSTVPEQVI AMRALKESLR VPDRMGWNGD PCAPTNWDAW EGITCHPNKD 420 ETAVVISQID LGSQGLKGYI SDKISLLSNL VNLNLSTNSL GGTLPSGLGQ QSLVRLDLSD 480 NQFTGSIPDS LTSSSKLQLV * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 3.0e-7 | 31 | 165 | 152 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 2.0e-11 | 220 | 329 | 111 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 8.0e-58 | 34 | 365 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 1.0e-95 | 33 | 500 | 479 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 22 | 493 | 20 | 491 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 22 | 500 | 20 | 497 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 26 | 500 | 25 | 496 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 31 | 498 | 29 | 497 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 27 | 500 | 19 | 491 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.0000003 | 381 | 488 | 31 | 127 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3rj0_A | 0.002 | 429 | 495 | 492 | 559 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
