CAZyme Information

Basic Information
SpeciesCitrus sinensis
Cazyme IDorange1.1g011114m
FamilyGH43
Protein PropertiesLength: 494 Molecular Weight: 56878.1 Isoelectric Point: 8.9369
ChromosomeChromosome/Scaffold: 00006 Start: 676058 End: 680492
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431904123.2e-32
  TYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISD
  YPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHA
  AESIMGPWEDMGNPCIGGNKVFR
Full Sequence
Protein Sequence     Length: 494     Download
MFGRVYYLRR LHFLNCSIIL GIKRKRKMRM RNKYKKPTTF PCNAGSKCSV SIILWILAGF    60
LLLLHFFSLV SHKDGTSGEI ELHISHNPSF RELVEVEEEN IQIPPPRGKR SPRAAKRRPK    120
RTTTLIDEFL DENSQLRHVF FPDMKTAIDP MKDNGNDSFY YYPGRIWLDT EGAPIQAHGG    180
GILYDERSRT YFWYGEYKDG PTYHAHKKAA ARVDIIGVGC YSSKDMWTWK NEGIVLAAEE    240
TNETHDLYKL NVLERPKVIY NDRTGKYVMW MHIDDCNYTK AAVGVAISDY PTGPFDYLYS    300
KRPHGFDSRD MTIFKDDDGV AYLVYSSEDN SELHIGPLTS DYLDVSNVVR RILVGQHREA    360
PALFKHLGTY YMVTSGCTGW APNEALVHAA ESIMGPWEDM GNPCIGGNKV FRLTTFFAQS    420
TYVIPLAGLP GLYIFMADRW NPADLRESRY IWLPLIVRGP ADRPLEYNFG FPLWSRVSIY    480
WHKKWRLPSR WSG* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_21.0e-15220403209+
cd08990GH43_AXH_like2.0e-18220401198+
cd09004GH43_bXyl7.0e-19219402196+
cd08978GH_F7.0e-47190455277+
cd08985GH43_64.0e-125175455282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU19498.104549215462unknown [Glycine max]
EMBLCBI33680.10284911430unnamed protein product [Vitis vinifera]
RefSeqNP_190557.10304894459glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.207248849466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.102049322497beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F016445545328A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3vt2_E016445545328A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3vt2_D016445545328A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3vt2_C016445545328A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3vt2_B016445545328A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
4870
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY7037302951724660
GO3743623501504920
GO8561533341584910
FC9238992392334710
GO8017532981954920
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny