Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011167m |
Family | GT47 |
Protein Properties | Length: 493 Molecular Weight: 55760.3 Isoelectric Point: 9.7296 |
Chromosome | Chromosome/Scaffold: 00111 Start: 322682 End: 326327 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 110 | 427 | 0 |
LRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLR GKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLA YFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITV HSTDAIKKGFLLNLLRGI |
Full Sequence |
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Protein Sequence Length: 493 Download |
MSEKGILPSR FLFCLITISM FLLIISSSFL LQFSSTSFIP RSVFKLILLN STSVFLKANV 60 ENEPMKLPFM SSKDSQTATG TSSNSNSGNR MAGSFGRQKG KKCDPGQVLL RVYMYDLPPE 120 FHFGLLGWKG KPNQTWPDVS KQSRIWPYPG GLNLQHSIEY WLTLDLLSSN IANIGRPCTT 180 IRVMNSSLAD VIFVPFFSSL SYNRYSKLRG KEKISVNKML QRKLVQFLMN QDGWKRLGGK 240 DHLIVAHHPN SMLDARRQLG SAMFVLADFG RYPVEIANVE KDIIAPYMHL VRTIPGGESP 300 PFDQRPTLAY FQGAIYRKDG GVIRQELYYL LKDEKDVHFT FGSIQGDGVK NAGQGMASSK 360 FCLNIAGDTP SSNRLFDAIA SHCVPVIISD EIELPFEDVL DYSEFCITVH STDAIKKGFL 420 LNLLRGIKQE QWTKMWERLK EVVQHFEYQY PSQPGDAVDM IWEAVSRKVP SVRFKIHKSN 480 RYIKSHHPVN SN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-55 | 110 | 427 | 327 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD55303.1 | 0 | 1 | 485 | 1 | 449 | AC008263_34 F25A4.34 [Arabidopsis thaliana] |
RefSeq | XP_002284930.1 | 0 | 1 | 486 | 1 | 449 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002284932.1 | 0 | 80 | 486 | 5 | 410 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002320639.1 | 0 | 110 | 484 | 3 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514760.1 | 0 | 1 | 482 | 1 | 484 | catalytic, putative [Ricinus communis] |