| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g011205m |
| Family | GH35 |
| Protein Properties | Length: 492 Molecular Weight: 54358.6 Isoelectric Point: 5.4781 |
| Chromosome | Chromosome/Scaffold: 00032 Start: 810894 End: 815371 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 183 | 0 |
| MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWG EKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVE | |||
| Full Sequence |
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| Protein Sequence Length: 492 Download |
| MVQIENEFGS YGDDKEYLHH LVTLARAHLG KDIILYTTDG GTRETLLKGT IRGDAVFAAV 60 DFSTGAEPWP IFKLQKQFNA PGKSPPLSSE FYTGWLTHWG EKIAKTDADF TASYLEKILS 120 QNGSAVLYMA HGGTNFGFYN GANTGNTESD YQPDLTSYDY DAPIKESGDV DNPKFKAIRR 180 VVEKFSPASL PSVLPDNEKA GFGPIQLQKT ALLFDLLDVL DPADVVESEN PLSMESVGQM 240 FGFLLYVSEF GGKDYGSSLL ISKVHDRAQV FISCPTEDNS GRPTYVGTIE RWSNRALSLP 300 NFRCGSNISL FVLVENMGRV NYGPYMFDEK GILSSVYLGG KVLRGWKMIP VPFHNLNEVP 360 KISPILEVAY SGLIKASARK KLEHNAGNIT KEPAFYVGRF SIDKVNQVKD TYLSFSGWGK 420 GIAFVNEFNL GRFWPSFGPQ CDLYVPAPIL RHGENLVVIF ELESPNSELV IHSVNQPDFT 480 CGSIKSNVLQ L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.0001 | 395 | 459 | 69 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 5.0e-8 | 1 | 463 | 501 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 9.0e-9 | 85 | 179 | 97 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-61 | 1 | 185 | 185 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD28499.1 | 0 | 1 | 491 | 1 | 492 | Galactose-binding like [Medicago truncatula] |
| EMBL | CBI35958.1 | 0 | 1 | 489 | 224 | 708 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280228.1 | 0 | 1 | 489 | 200 | 684 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 1 | 491 | 158 | 643 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527397.1 | 0 | 36 | 491 | 153 | 605 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 2 | 463 | 160 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_C | 0 | 2 | 463 | 160 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_B | 0 | 2 | 463 | 160 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_A | 0 | 2 | 463 | 160 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thc_D | 0 | 2 | 463 | 160 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EY723876 | 266 | 7 | 272 | 0 |
| EY707224 | 296 | 162 | 457 | 0 |
| CX296803 | 229 | 33 | 261 | 0 |
| CV716889 | 209 | 284 | 492 | 0 |
| EY723876 | 23 | 267 | 289 | 9 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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