y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011220m |
Family | GT47 |
Protein Properties | Length: 491 Molecular Weight: 56535.7 Isoelectric Point: 8.3467 |
Chromosome | Chromosome/Scaffold: 00031 Start: 236320 End: 238212 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 93 | 433 | 0 |
ELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLA VGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSAS DVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFW KRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLES |
Full Sequence |
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Protein Sequence Length: 491 Download |
MLPYSKLPSP DPPPKKSKFP ELDQKSSLNG LIYPTLSLQS PRSWLLLVIL LLQVIFVLVL 60 RSVSMSFSTS HVAPQQSHPE ISASVPRVSD QCELGKIYVY DLPKALNEDL LQNCHELNPW 120 GSRCDMLLND GFGRQASALN GVVPENLVPA WHWTDQFVLE IIFHRRILNH RCRTLEPESA 180 AAFYIPFYVG LAVGKYLWSD SSAKARDMHC DLMLKWVQDQ PYWNRSDGWD HFTAMGRITW 240 DFRRSKDEDW GSSCIYKKAM RNITRLLIER NPWDYFDVGV PYPTGFHPRS ASDVTQWQDY 300 VRSRNRSSLY CFAGATRMVK NDFRSMLLSH CKNESGSCRV VDCEGTRCMN GTSAILETFL 360 DSVFCLQPRG DSFTRRSIFD CMVAGSIPVF FWKRSAYFQY AWFLPDEPGS YSVFIDRNEV 420 RNGTKSIKAV LESYSQEEVK RMRDKVIDYI PKFIYAKSRE GLGTIKDAFD VAIDGVLRRI 480 KEQQELGFKW * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-54 | 91 | 434 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 1 | 490 | 1 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 490 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 3 | 490 | 11 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 1 | 490 | 2 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 490 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |