| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g011468m |
| Family | CBM43 |
| Protein Properties | Length: 486 Molecular Weight: 53486.7 Isoelectric Point: 7.1125 |
| Chromosome | Chromosome/Scaffold: 00026 Start: 983596 End: 986741 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 368 | 447 | 6.9e-26 |
| WCVVNNNKDLSNATAIALEACSVADCSAISPGGSCYNISWPRNISYAFNSYYQQHNQRHDNCDFGGLGLITTVDPSADNC | |||
| GH17 | 24 | 348 | 0 |
| IGVNWGTNASHPLPPAKVVELLKSNNIAKVKLFDADPLVLEALSGSNIGVTVGIPNSLLKSLNSSKKAAESWVHDNVTRYFSAGHGNGVRFEYVALGDEP FLQSYSEQFHPFIIGAAMNIQIALGRANLASEVKVVVPCSFDTFLSESGKPSGGHFRPDLNKTMIELLEFLSKHHSPFFVTISPFISFHQNKNISLDFAL FKETAHPHKDSHKTYKNSFDLSYDTLVTALSTVGFPEMDIVVAQIGWPTDGVANATSSTAEIFMKGLINHLRSRSGTPLRPRNPPIETYIYSLLDEDQRR TATGNFERHWGVFTFDGQAKYHLNF | |||
| Full Sequence |
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| Protein Sequence Length: 486 Download |
| MSPYLTLLVL LLAIPSMGSL AGAIGVNWGT NASHPLPPAK VVELLKSNNI AKVKLFDADP 60 LVLEALSGSN IGVTVGIPNS LLKSLNSSKK AAESWVHDNV TRYFSAGHGN GVRFEYVALG 120 DEPFLQSYSE QFHPFIIGAA MNIQIALGRA NLASEVKVVV PCSFDTFLSE SGKPSGGHFR 180 PDLNKTMIEL LEFLSKHHSP FFVTISPFIS FHQNKNISLD FALFKETAHP HKDSHKTYKN 240 SFDLSYDTLV TALSTVGFPE MDIVVAQIGW PTDGVANATS STAEIFMKGL INHLRSRSGT 300 PLRPRNPPIE TYIYSLLDED QRRTATGNFE RHWGVFTFDG QAKYHLNFGQ NAEKLVNARN 360 VEYLPSRWCV VNNNKDLSNA TAIALEACSV ADCSAISPGG SCYNISWPRN ISYAFNSYYQ 420 QHNQRHDNCD FGGLGLITTV DPSADNCRFS IELRTSYSAS LHGAYLFLWT VLLMFSTFTC 480 LSKFT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 262 | 339 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-16 | 367 | 435 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-31 | 368 | 449 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-65 | 24 | 348 | 326 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 24 | 481 | 35 | 488 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 21 | 483 | 20 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 18 | 469 | 20 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 23 | 478 | 25 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 23 | 478 | 21 | 475 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 24 | 348 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_C | 0 | 24 | 348 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_B | 0 | 24 | 348 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3f55_A | 0 | 24 | 348 | 2 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 3em5_D | 0 | 24 | 348 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
