| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g011685m |
| Family | GT47 |
| Protein Properties | Length: 480 Molecular Weight: 54014.2 Isoelectric Point: 9.1623 |
| Chromosome | Chromosome/Scaffold: 00008 Start: 1578827 End: 1582218 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 91 | 403 | 0 |
| SKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAA HRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGN RYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAA TKPGFLISTLRAV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MNRKPKPISP PMSPPPLPSI PNSQSHKTLT PISLMARKSS LLKQTLIVLA LFILAVYAFV 60 NTFFSPPVAA DADPAFNKLS QQNSNIEFKS SKVKVYMYNL PRKFTYGIIE QHSMARGGLV 120 GPVADVSMLK YPGHQHMGEW YVFSDLSRPE SERVGSPVVK VTDPGEADLF FVPVFSSLSL 180 VVNVGGPAAA HRYSDEEMQE ELVEWLEQQE YWRRNNGRDH VIIAGDPNAM LRVMDRIKNA 240 VLLVSDFGRL RVDQGSLVKD VVIPYSHRIN TYTGDPRVDN RNTLLFFMGN RYRKEGGKIR 300 DLLFNILETE EDVVIKHGTQ SRESRRAATQ GMHTSKFCLN PAGDTPSACR LFDAIVSLCV 360 PVIVSDSIEL PFEDVIDYRK IAVFVETSAA TKPGFLISTL RAVTPDRILE YQRELKKVQR 420 YFIYDHPNGA VNEIWREVSQ KLPLIKIMIN RDKRLVRRES SEPVCSSLCT NQSGLITSL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-62 | 89 | 403 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_850241.1 | 0 | 35 | 479 | 1 | 447 | ARAD1 (ARABINAN DEFICIENT 1); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002276440.1 | 0 | 1 | 479 | 3 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318294.1 | 0 | 97 | 479 | 1 | 382 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322391.1 | 0 | 35 | 479 | 1 | 457 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523645.1 | 0 | 35 | 479 | 1 | 452 | catalytic, putative [Ricinus communis] |
