| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g011712m |
| Family | CBM49 |
| Protein Properties | Length: 480 Molecular Weight: 52170.9 Isoelectric Point: 9.7392 |
| Chromosome | Chromosome/Scaffold: 00009 Start: 1489834 End: 1493745 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 387 | 464 | 9.6e-38 |
| IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIH | |||
| GH9 | 4 | 333 | 0 |
| DRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDY LGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSD YLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPD AYDNFGDRRDNYEQTEPATYNNAPILGILA | |||
| Full Sequence |
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| Protein Sequence Length: 480 Download |
| MTTDRRAYKI DPSNPGSDLA GETAAAMAAA SIVFRHSDPA YSSELLRHAY QLFDFADKYR 60 GKYDGSITVA QKYYRSISGY NDELLWAAAW LYQASGNQHY LDYLGKNGDS MGGTGWGMTE 120 FGWDVKYPGV QTLVAKFLMQ GKAGHYAPVF ERYQQKAEYF MCSCLGKGSR NVQKTPGGLI 180 FRQRWNNMQF VTSASFLATV YSDYLASAGR DLKCSAGNVA PAELLGFAKS QVDYILGDNP 240 RATSYMVGYG NNYPQRVHHR ASSIVSIKVN PSFVSCRGGY ATWFSSKGSD PNLLVGAVVG 300 GPDAYDNFGD RRDNYEQTEP ATYNNAPILG ILARLNAGHG GYNQLLPVIV PAATPVVTKP 360 SPAPKPKTIP PTKPKTTPAP ASSSGAIAIQ QKLTTSWISN GKRYYRYSTI VTNKSAKTLK 420 NLKLSISKLY GPLWGLTNLG NAYGFPSWLN NLAAGKSLEF VYIHTANAAD VSVSAYTLA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 1.0e-16 | 393 | 476 | 86 | + endoglucanase | ||
| PLN00119 | PLN00119 | 8.0e-135 | 1 | 335 | 335 | + endoglucanase | ||
| PLN02340 | PLN02340 | 5.0e-145 | 1 | 335 | 336 | + endoglucanase | ||
| PLN02420 | PLN02420 | 1.0e-147 | 1 | 335 | 337 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 1 | 479 | 479 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI68019.1 | 0 | 1 | 479 | 156 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| EMBL | CAI68020.1 | 0 | 1 | 479 | 156 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 1 | 479 | 159 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 1 | 479 | 156 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 1 | 478 | 156 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 1 | 337 | 133 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ksc_A | 0 | 1 | 337 | 133 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ks8_A | 0 | 1 | 337 | 133 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 1 | 335 | 155 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 7.00649e-44 | 1 | 341 | 134 | 446 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FG829580 | 269 | 49 | 317 | 0 |
| EX680399 | 279 | 35 | 313 | 0 |
| ES907037 | 284 | 63 | 346 | 0 |
| DV466210 | 274 | 4 | 277 | 0 |
| EY654794 | 241 | 106 | 346 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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