Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g012284m |
Family | GT14 |
Protein Properties | Length: 468 Molecular Weight: 52315.5 Isoelectric Point: 8.0791 |
Chromosome | Chromosome/Scaffold: 00538 Start: 50022 End: 54220 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 122 | 373 | 0 |
LAYLISGSAGDAARIVRLLHAVYHPKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAGSTSISSTLHGASILLKLSKNWDWFIN LNAADYPLIKQDDLLHILSYMPKELNFVNHTSYLDRRDSSRMKRIIVDPGLYLSEQNPMFYVSQKRQLPNAFRLFSGSAVVILSRNFVEFCILGTDNLPR TLLMYLSNTPSSFPNYFPTILCNSHQFNKTVINDSLLYVACDKPSKQNCTLN |
Full Sequence |
---|
Protein Sequence Length: 468 Download |
MLEKERNIKT THILKHNAIP IQIQIQQLTD NRENLITMHH SSPSAPPSTP PSMSVPRDQT 60 KATRSVLLTT LFFSLLFLVS FYSTSSSSRR SIDSQTQSDP FLFPTRPAFP SKIPSHPAPP 120 SLAYLISGSA GDAARIVRLL HAVYHPKNQY LLHLDQSAPQ AERDSLAVTI ESVPVFRAAQ 180 NVDVIGKADF SYPAGSTSIS STLHGASILL KLSKNWDWFI NLNAADYPLI KQDDLLHILS 240 YMPKELNFVN HTSYLDRRDS SRMKRIIVDP GLYLSEQNPM FYVSQKRQLP NAFRLFSGSA 300 VVILSRNFVE FCILGTDNLP RTLLMYLSNT PSSFPNYFPT ILCNSHQFNK TVINDSLLYV 360 ACDKPSKQNC TLNSTEFDDM IQSGAIFASQ FQFDDPVLDR IDREILNRSP GNVVPGGWCL 420 GEPGNNTCSV WGDADILRPG PGSRRLENRL IEMFSGGNFR SQQCILE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 6.0e-53 | 122 | 361 | 240 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-125 | 105 | 464 | 371 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80510.1 | 0 | 92 | 467 | 50 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189046.1 | 0 | 99 | 467 | 50 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282998.1 | 0 | 94 | 467 | 52 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 66 | 467 | 26 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 51 | 467 | 21 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000001 | 138 | 409 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000001 | 138 | 409 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000001 | 138 | 409 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000001 | 138 | 409 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000003 | 138 | 409 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |