| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g012660m |
| Family | CBM43 |
| Protein Properties | Length: 460 Molecular Weight: 51245.7 Isoelectric Point: 8.3064 |
| Chromosome | Chromosome/Scaffold: 00304 Start: 150728 End: 152107 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 379 | 457 | 1e-23 |
| WCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPS | |||
| GH17 | 28 | 352 | 0 |
| IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSS EEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRE TNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDEN QKTGPGTERHWGMLHGNGVPIYEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 460 Download |
| MSLFFYITWV LVLSSKFYLA SAETSDKIGI NYGKLGSNLP SSYQSIESIK FLQAGSVKIY 60 DANPEILKLL SGTDLKVSIM VQNHEIIDIA SKQKVADQWV HDNVLSFYPE TMIRFILVGN 120 EILSQSSEEY KQIWKNLVPA MHRIKKCLNA HNIHNIKVGT PLAMDIFQTT FPPSNGTFRS 180 DISASVMEPL LQFLNRTKSF FFLDVYPYFA WSTNPKTISL DFALLRETNT SYTDPNSGLV 240 YTNLLDQMLD SVIFAMAKLG YSDIRLAISE TGWPNAGDFD QIGANIYNAA TYNRNLIKKM 300 TSKPALGTPA RPGSIIPTFI FSLYDENQKT GPGTERHWGM LHGNGVPIYE IDLSGNRSLS 360 QYRPLPLAHN NVPYKGKVWC VVARGADLLA LTSALGYACG QGNGTCDALV PGQRCYQPLS 420 LYWHASYAFS SYWAKFMGKG ATCYFNGLAQ QTIINPSEF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-14 | 379 | 449 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-26 | 379 | 457 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-111 | 28 | 352 | 326 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 25 | 456 | 34 | 464 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 25 | 456 | 34 | 464 | unknown [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 10 | 457 | 11 | 456 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189019.1 | 0 | 25 | 456 | 34 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 3 | 458 | 2 | 452 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 353 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 28 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 28 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 28 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 28 | 353 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
