Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g013886m |
Family | GH3 |
Protein Properties | Length: 435 Molecular Weight: 47874.9 Isoelectric Point: 6.1442 |
Chromosome | Chromosome/Scaffold: 00026 Start: 443110 End: 448134 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 145 | 9.8e-39 |
TSIVSGLQGRPPKEHPKGYPYVAGRNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCISQGVCTIMASYSSWNGRKLHADHFLLTEVLK NKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 435 Download |
MTSIVSGLQG RPPKEHPKGY PYVAGRNNVI ACAKHFVGDG GTERGINEGN TISTYDDLEK 60 IHMAPYLDCI SQGVCTIMAS YSSWNGRKLH ADHFLLTEVL KNKLGFKGFV ISDWEGLDRL 120 SQPHGSNYRY CISTAVNAGI DMVMVPHRFD QFFEDLTYLV ESGKVPMSRI DDAVERILRV 180 KFVAGLFEYP FSDKSLLNIV GCKLHRELAR EAVRKSLVLL KNGKKPEKPF LPLDRNAKRI 240 LVVGTHADDL GYQCGGWTKT WFGMSGKITI GTTILEAVKE AVGDETEVIY EKYPSPDTFV 300 AGDFSFAIAA VGEEPYAETL GDNSELIIPL NGGDVISLVA ERIPTLAILV SGRPLVLEPQ 360 LLEKADALVA AWLPGSEGSG IADVVFGDHD FTGRLPVTWY RSVQRLPMNV ADNTYDPLFP 420 LGFGLTYKKE KSLH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 7.0e-29 | 5 | 429 | 476 | + Probable beta-xylosidase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 3.0e-41 | 21 | 180 | 172 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 7.0e-50 | 27 | 282 | 259 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-51 | 217 | 427 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-58 | 4 | 427 | 492 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 1 | 434 | 204 | 639 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 1 | 434 | 151 | 586 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 1 | 434 | 285 | 720 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 1 | 433 | 170 | 602 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 1 | 426 | 174 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 431 | 173 | 603 | F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin |
PDB | 1iex_A | 0 | 1 | 431 | 173 | 603 | F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin |
PDB | 1iew_A | 0 | 1 | 431 | 173 | 603 | F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin |
PDB | 1iev_A | 0 | 1 | 431 | 173 | 603 | F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin |
PDB | 1ieq_A | 0 | 1 | 431 | 173 | 603 | F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 326 | 1 | 321 | 0 |
FC882555 | 248 | 1 | 248 | 0 |
HO795479 | 324 | 106 | 428 | 0 |
GO800387 | 333 | 1 | 332 | 0 |
GO876678 | 318 | 58 | 375 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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