| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g014083m |
| Family | GH3 |
| Protein Properties | Length: 432 Molecular Weight: 46041.3 Isoelectric Point: 6.8238 |
| Chromosome | Chromosome/Scaffold: 00016 Start: 747022 End: 752681 |
| Description | beta-xylosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 8 | 180 | 0 |
| GLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGK VASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC | |||
| Full Sequence |
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| Protein Sequence Length: 432 Download |
| MYNGGMAGLT YWSPNVNIFR DPRWGRGQET PGEDPVLTGK YAASYVRGLQ GNTGSRLKVA 60 ACCKHYTAYD LDNWNGVDRY HFNARVSKQD LEDTYNVPFK ACVVEGKVAS VMCSYNQVNG 120 KPTCADPDIL KNTIHGQWRL DGYIVSDCDS VGVLYNTQHY TRTPEEAAAD AIKAGLDLDC 180 GPFLAIHTEG AVRGGLLREE DVNLALAYTI TVQMRLGMFD GEPSAQPFGN LGPRDVCTPA 240 HQQLALQAAH QGIVLLKNSA RTLPLSTLRH HTVAVIGPNS DVTVTMIGNY AGVACGYTTP 300 LQGISRYAKT IHQAGCFGVA CNGNQLIGAA EVAARQADAT VLVMGLDQSI EAEFIDRAGL 360 LLPGRQQELV SRVAKASRGP VVLVLMCGGP VDVSFAKNDP RIGAILWVGY PGQAGGAAIA 420 DVLFGRANPG T* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 3.0e-41 | 12 | 316 | 310 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-48 | 11 | 203 | 196 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-48 | 253 | 430 | 186 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 3.0e-55 | 12 | 429 | 469 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 1 | 430 | 440 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP83934.1 | 0 | 1 | 430 | 140 | 570 | auxin-induced beta-glucosidase [Chenopodium rubrum] |
| DDBJ | BAG28345.1 | 0 | 1 | 430 | 142 | 571 | arabinofuranosidase [Citrus unshiu] |
| RefSeq | XP_002311398.1 | 0 | 1 | 430 | 134 | 562 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316021.1 | 0 | 1 | 430 | 142 | 570 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519194.1 | 0 | 1 | 430 | 156 | 585 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 1.96182e-44 | 12 | 429 | 128 | 561 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3u48_A | 1.96182e-44 | 12 | 429 | 128 | 561 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3u4a_B | 7.9874e-44 | 12 | 429 | 128 | 561 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3u4a_A | 7.9874e-44 | 12 | 429 | 128 | 561 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3rrx_A | 1e-29 | 12 | 424 | 157 | 565 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY263657 | 306 | 125 | 430 | 0 |
| FC882636 | 292 | 125 | 416 | 0 |
| GW867487 | 317 | 106 | 422 | 0 |
| DY274096 | 315 | 56 | 370 | 0 |
| GW867089 | 307 | 29 | 335 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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