Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g014248m |
Family | GT14 |
Protein Properties | Length: 429 Molecular Weight: 48254.5 Isoelectric Point: 8.6901 |
Chromosome | Chromosome/Scaffold: 00468 Start: 88150 End: 90863 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 66 | 311 | 0 |
LAYWICGTNGDSKKMLRLLKAIYHPRNQYLLQLDAGAPESERAELALKVQSEIVFKAFGNVDVVGASYAIDKMGVSALAATLHAAALLLKISTNWDWFIP LSPLDYPLMSQDDVLHAFTFLPRDLNFIDFTTNTGWKERLMINRIVIDPNLYYKKATPILYAVETRTNPDAFKIFGGSQWMILSRSFMEYCVQGWDNFPR KLLMYLTNVPYPLESYFHTIICNSPQFQNSTINTDLSFMKWESPAH |
Full Sequence |
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Protein Sequence Length: 429 Download |
MSKISYKVSG HQLWILAFIS SIILLATLSR SNVQVDQFSA SGIKLKSHNQ VPRRNVSKGV 60 DYPPVLAYWI CGTNGDSKKM LRLLKAIYHP RNQYLLQLDA GAPESERAEL ALKVQSEIVF 120 KAFGNVDVVG ASYAIDKMGV SALAATLHAA ALLLKISTNW DWFIPLSPLD YPLMSQDDVL 180 HAFTFLPRDL NFIDFTTNTG WKERLMINRI VIDPNLYYKK ATPILYAVET RTNPDAFKIF 240 GGSQWMILSR SFMEYCVQGW DNFPRKLLMY LTNVPYPLES YFHTIICNSP QFQNSTINTD 300 LSFMKWESPA HVGPRTLTLP DYVEMVTSNK TTIFARPFEE DDPVLEKIDD RVLNRSGNGV 360 VPGNWCSIRG KKKNVESLKN GEELCSASGN NIDAVKPGVY GMKLRALLSE LVSDGRGKIN 420 QCQEQVYN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-55 | 66 | 326 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-108 | 64 | 423 | 360 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 57 | 422 | 56 | 413 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 56 | 425 | 65 | 423 | unknown [Picea sitchensis] |
RefSeq | XP_002284096.1 | 0 | 56 | 423 | 45 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310932.1 | 0 | 57 | 422 | 35 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 21 | 422 | 2 | 401 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000009 | 82 | 307 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000009 | 82 | 307 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000009 | 82 | 307 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000009 | 82 | 307 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000003 | 82 | 307 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |