Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g014373m |
Family | GH5 |
Protein Properties | Length: 427 Molecular Weight: 48481.5 Isoelectric Point: 6.3541 |
Chromosome | Chromosome/Scaffold: 00036 Start: 184780 End: 187165 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 38 | 372 | 3.7e-36 |
NDQPFYVNGFNTYWLMVFAADQSTRGKVSELFHQASSAGLTVCRTWAFNDGQWRALQTSPSVYDEEVFKALDFVISEAKKYKIRLILSLTNNWDAYGGKA QYVKWGKAAGLNLTSDDEFFSHTTLKSYYKAHVKTVLNRVNTFTNLTYKNDPTIFAWELMNEPRCTSDPSGDTLQSWIQEMAVYVKSIDAKHLVEIGLEG FYGPSAPDRAKFNPNSYATQVGTDFIRNHQTLGVDFASVHIYADSWISQTISDAHLQFTKSWMEAHIEDAEKYLRMPVLFTEFGVSAKDTGYNTSFRDTL ISSVYKTLLNSTKKGGSGAGSLLWQLFPDGTDYMN |
Full Sequence |
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Protein Sequence Length: 427 Download |
MAEERREFPS LQRIYDLQVR EDDDWQMVQK QGNQFVVNDQ PFYVNGFNTY WLMVFAADQS 60 TRGKVSELFH QASSAGLTVC RTWAFNDGQW RALQTSPSVY DEEVFKALDF VISEAKKYKI 120 RLILSLTNNW DAYGGKAQYV KWGKAAGLNL TSDDEFFSHT TLKSYYKAHV KTVLNRVNTF 180 TNLTYKNDPT IFAWELMNEP RCTSDPSGDT LQSWIQEMAV YVKSIDAKHL VEIGLEGFYG 240 PSAPDRAKFN PNSYATQVGT DFIRNHQTLG VDFASVHIYA DSWISQTISD AHLQFTKSWM 300 EAHIEDAEKY LRMPVLFTEF GVSAKDTGYN TSFRDTLISS VYKTLLNSTK KGGSGAGSLL 360 WQLFPDGTDY MNDGYAIVLS KSPSTSNIIS LHSTRIATFN SLCSTKCKWG CKKKTPLEEF 420 LYHDDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.005 | 184 | 279 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
COG2730 | BglC | 0.0001 | 67 | 379 | 341 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 1.0e-6 | 38 | 332 | 303 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-23 | 105 | 392 | 297 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 1 | 426 | 36 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 14 | 426 | 59 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 13 | 426 | 3 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 11 | 426 | 1 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 12 | 426 | 57 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 28 | 397 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 36 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 36 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 36 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 36 | 388 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK987915 | 295 | 21 | 315 | 0 |
DT747977 | 293 | 27 | 319 | 0 |
DY974976 | 272 | 21 | 292 | 0 |
EL450176 | 269 | 38 | 306 | 0 |
JG000902 | 245 | 167 | 411 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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