Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g015179m |
Family | GH5 |
Protein Properties | Length: 413 Molecular Weight: 46710.8 Isoelectric Point: 6.408 |
Chromosome | Chromosome/Scaffold: 00001 Start: 3664514 End: 3667947 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 47 | 372 | 1.2e-36 |
NGKPLYLNGFNAYWMLYYAGDPSTKAKVTAAFQQATKYGMNIARTWAFSDGGYRALQVSPGSYNEDTFKALDFVVAEAREYGVYVILSLVNNFKEYGGRP RYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEG FYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYKYPGYSEQKRNSY FQKVYDAIYDCAKSKGPCGGGLFWQL |
Full Sequence |
---|
Protein Sequence Length: 413 Download |
MLVTRLFNSF IFLALLVIIY LNTYIYMAKA NPNQEFAQTN GSHFAVNGKP LYLNGFNAYW 60 MLYYAGDPST KAKVTAAFQQ ATKYGMNIAR TWAFSDGGYR ALQVSPGSYN EDTFKALDFV 120 VAEAREYGVY VILSLVNNFK EYGGRPRYVE WARERGQSLK NEDDFYTNAV VKQYYKNHVK 180 AVLTRINSIT GVAYKDDPTI FAWELMNEAR CPTDPSGTLL QEWIKEMAAH VKSIDNHHLL 240 EVGLEGFYGE SVPERQKYNP NNTPVGTDFI TNNQIPDVDF ATIHIYPEQW LPPGNTSDEI 300 QLAFVNRWIQ AHIQDSDSIL KKPILIGEFG KSYKYPGYSE QKRNSYFQKV YDAIYDCAKS 360 KGPCGGGLFW QLMTQGMTNF GDGYEVVLES SPSTANIINQ QSLRLAVLSS IT* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 3.0e-6 | 12 | 210 | 203 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 7.0e-8 | 47 | 362 | 324 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 5.0e-25 | 44 | 384 | 342 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK56557.1 | 0 | 10 | 405 | 7 | 395 | mannan endo-1,4-beta-mannosidase [Solanum lycopersicum] |
EMBL | CAC08442.1 | 0 | 38 | 409 | 46 | 416 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
Swiss-Prot | Q8L5J1 | 0 | 10 | 409 | 7 | 399 | MAN4_SOLLC RecName: Full=Mannan endo-1,4-beta-mannosidase 4; AltName: Full=Beta-mannanase 4; AltName: Full=Endo-beta-1,4-mannanase 4; AltName: Full=LeMAN4a; AltName: Full=LeMAN4i; Flags: Precursor |
RefSeq | XP_002302695.1 | 0 | 5 | 405 | 2 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 5 | 408 | 2 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 33 | 409 | 3 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 41 | 397 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 41 | 397 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 41 | 397 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 41 | 397 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |