y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g015219m |
Family | GT14 |
Protein Properties | Length: 412 Molecular Weight: 47032.5 Isoelectric Point: 9.7531 |
Chromosome | Chromosome/Scaffold: 00314 Start: 103997 End: 106900 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 65 | 318 | 0 |
LAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFIN LSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPR TLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTL |
Full Sequence |
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Protein Sequence Length: 412 Download |
MKKPHISSSL DRTWLPPLIS ISLLSLLIIL TVTFSHSRSS SSSSDFTVSD QILDSRFGQP 60 ALPRLAYLIS GTKGDGARVK RVLQAVYHPM NYYVLHLDLE ASDGERLELA KYVKSEKVIR 120 DFKNVMVIGK ADLVTYKGPT MIAATLHAVA ILLKQAKDWD WFINLSASDY PLMSQDDILH 180 IFSYLPKYLN FLEHTSSIGW KEYQRARPII IDPGLYHPKK SGVFWAKEKR SMPASFKLFM 240 GSAWVVLTRS FLEFCIWGWD NLPRTLLMYY TNFLSSPEGY FHSVICNHKD YQNTTVNHDL 300 HYIRWDSPPK QHPMTLTLKH FDDMVRSGAP FARKFAKDDP VLNKIDENLL KRSNNRFTPG 360 GWCVGNSAFG KDPCLVYGNP YAIKPSVNSK TLEKLIVKLL DPEIFRSKQC K* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-73 | 65 | 325 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 59 | 411 | 353 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK26987.1 | 0 | 32 | 410 | 45 | 423 | unknown [Picea sitchensis] |
GenBank | ACU24011.1 | 0 | 61 | 411 | 48 | 398 | unknown [Glycine max] |
RefSeq | XP_002269924.1 | 0 | 40 | 411 | 85 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309670.1 | 0 | 1 | 411 | 1 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527729.1 | 0 | 59 | 410 | 37 | 388 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000000003 | 81 | 331 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000000003 | 81 | 331 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000000003 | 81 | 331 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000000003 | 81 | 331 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000000008 | 81 | 331 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |