Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g015794m |
Family | CE8 |
Protein Properties | Length: 401 Molecular Weight: 44364.5 Isoelectric Point: 9.593 |
Chromosome | Chromosome/Scaffold: 00001 Start: 4905640 End: 4908787 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 88 | 383 | 0 |
LIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAG PSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVFQICNLYARKPNANQKNIITAQGREDPNQNTGISILNCKVAA ASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTSARVTWPGYRVINNSAVAAQFTAGPFLQG |
Full Sequence |
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Protein Sequence Length: 401 Download |
MTNQYTCLDG FAYSDGNVRD VIKSSLYNIS RHVSNSLVML KKIPGDNMSS KYEVFPEYGR 60 IKRGFPTWLS LNDRKLLQKS VNLTKFDLIV AKDGSGNFTT ITEAVEAAPN KSNTRFVIYI 120 KAGAYFENVE VDKKKTMLMF VGDGIGKTVV KANRSVVDGW TTFRSATVAV VGTGFIAKGI 180 TVENSAGPSK HQAVALRSGS DLSAFYKCSF VGYQDTLYVH SLRQFYRECD VYGTVDFIFG 240 NAAVVFQICN LYARKPNANQ KNIITAQGRE DPNQNTGISI LNCKVAAASD LIPYQTEFKT 300 YLGRPWKEYS RTVFMLSYLG DLIAPAGWLE WNGTFALSTL FYGEYKNRGP GSNTSARVTW 360 PGYRVINNSA VAAQFTAGPF LQGSEWLNST GIPFYLNLTP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 6.0e-175 | 1 | 394 | 394 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 6.0e-177 | 1 | 399 | 406 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 0 | 1 | 398 | 406 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 87 | 384 | 298 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 1 | 394 | 417 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 1 | 398 | 164 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
RefSeq | NP_001060620.1 | 0 | 1 | 399 | 179 | 579 | Os07g0675100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002271665.1 | 0 | 1 | 399 | 162 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 1 | 398 | 53 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 1 | 399 | 159 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 87 | 398 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 89 | 394 | 6 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-23 | 84 | 306 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-23 | 84 | 306 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-23 | 84 | 306 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 399 | 1 | 399 | 0 |
ES850416 | 340 | 56 | 394 | 0 |
HO852920 | 399 | 1 | 398 | 0 |
DT544087 | 308 | 36 | 343 | 0 |
EY850807 | 282 | 115 | 381 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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