Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g016140m |
Family | GH5 |
Protein Properties | Length: 395 Molecular Weight: 44308.3 Isoelectric Point: 8.9804 |
Chromosome | Chromosome/Scaffold: 00380 Start: 52211 End: 54689 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 43 | 346 | 1.4e-32 |
NGSPFLFNGFNSYWMMNVASQPSQRYKVSDVFRQAAAAGLSVCRTWAFSDGGYGALQQSPGVYNEPVFQGLDFVISEARKYGIRLILSLSNNYHDFGGRP QYVNWARAAGASVNSDDEFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEARCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEG FYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNDYAQMQFVQKWLASHWTDSKTILKKPLVFSEFGKSSKEAGFSINVRDSFLNT IYMN |
Full Sequence |
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Protein Sequence Length: 395 Download |
MLKAPAKFSF LWAIALLLHL ASAQTLPAQA GFVQTRGTQF VLNGSPFLFN GFNSYWMMNV 60 ASQPSQRYKV SDVFRQAAAA GLSVCRTWAF SDGGYGALQQ SPGVYNEPVF QGLDFVISEA 120 RKYGIRLILS LSNNYHDFGG RPQYVNWARA AGASVNSDDE FYTNAIVKGY YKNHVKKVLT 180 RINTITRIAY KDDPTIMAWE LINEARCQAD YSGKTLNNWV QEMASYVKSI DNKHLLEIGL 240 EGFYGDSIPD KKQFNPGYQV GTDFISNNMI KEIDFTTIHA YPDQWLPGKN DYAQMQFVQK 300 WLASHWTDSK TILKKPLVFS EFGKSSKEAG FSINVRDSFL NTIYMNIYNL ARNGGAIGGG 360 MVWQLMAEGM QPYFDGYEIV LSQNPSTRSV ILHG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.006 | 39 | 206 | 174 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 3.0e-5 | 43 | 327 | 294 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 3.0e-22 | 40 | 365 | 335 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC08208.1 | 0 | 9 | 391 | 15 | 396 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CBI17044.1 | 0 | 21 | 391 | 84 | 436 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270023.1 | 0 | 8 | 391 | 10 | 390 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 6 | 391 | 5 | 389 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 20 | 391 | 20 | 390 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 32 | 392 | 6 | 363 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 36 | 390 | 17 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 36 | 390 | 17 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 36 | 390 | 17 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 36 | 390 | 17 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |