Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g016354m |
Family | GT14 |
Protein Properties | Length: 392 Molecular Weight: 44924.1 Isoelectric Point: 7.413 |
Chromosome | Chromosome/Scaffold: 00005 Start: 2296412 End: 2299072 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 133 | 299 | 0 |
NVGGDWDWFINLSASDYPLVTQDDLLHVLSTIPRNLNFIEHTSDIGWKEYQRAKPVIIDPGLYTVQKSDVFWVPEKRNVPTAYKLFTGSAWMMLSRPFIE FCLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPKQHPHFLNVDD |
Full Sequence |
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Protein Sequence Length: 392 Download |
MDNINNNKQQ PQQKKQKWFF SLVFSLLLST ILIIISVSMS STSTKFYNRA YVQTPRPRFV 60 EQQLQVVSTS SEKIPRLAYL ISGSTGDGES LKRTLKALYH PRNQYAVHLD LEAPVEERLE 120 LARFVESEPL FVNVGGDWDW FINLSASDYP LVTQDDLLHV LSTIPRNLNF IEHTSDIGWK 180 EYQRAKPVII DPGLYTVQKS DVFWVPEKRN VPTAYKLFTG SAWMMLSRPF IEFCLWGWDN 240 LPRIVLMYYA NFLSSPEGYF HTVICNAEEF RNTTVNHDLH FISWDNPPKQ HPHFLNVDDY 300 QRMVDSNAPF ARKFGRNEPV LDKIDSELLG RIADGFVPGG WFNNKRNSNL TAPNHAVANT 360 SELKPGAGAE RIKRLITGLI SAEDFHAKHC I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 8.0e-65 | 77 | 304 | 259 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-175 | 56 | 390 | 371 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28190.1 | 0 | 43 | 390 | 113 | 471 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ01579.1 | 0 | 57 | 391 | 68 | 444 | hypothetical protein OsI_23613 [Oryza sativa Indica Group] |
RefSeq | NP_001130420.1 | 0 | 57 | 391 | 68 | 439 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002285159.1 | 0 | 43 | 390 | 47 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 57 | 390 | 58 | 428 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0006 | 89 | 264 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0006 | 89 | 264 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0006 | 89 | 264 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0006 | 89 | 264 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.002 | 89 | 264 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |