y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g017112m |
Family | AA1 |
Protein Properties | Length: 378 Molecular Weight: 41217.2 Isoelectric Point: 7.9373 |
Chromosome | Chromosome/Scaffold: 00017 Start: 16649 End: 18326 |
Description | laccase 11 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 2 | 370 | 0 |
GLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYF MAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNN ISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK YPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPP |
Full Sequence |
---|
Protein Sequence Length: 378 Download |
MGLPPNMSDA HTINGKPGPL FPCSEKHTFA MEVESGKTYL LRIINAALND ELFFAIAGHN 60 FTVVEVDAVY TKPFTTEAIL IAPGQTTNVL VQANQKPGRY FMAARPFNDA PIPVDNKTAT 120 GILQYKGIPN SLLPTLAQLP ASNDSEFALN YNKKLRSLNS PKFPADVPQK VDRKLFYTIG 180 FGKDSCPTCV NGTRLLATLN NISFVMPQTA LLQAHYFNLK GVFKADFPDK PPKPFNYTGA 240 PLTASLGTSR ATRLSKIAFN STIELVLQDT NLLTVESHPF HLHGYNFFVV GTGIGNFDPV 300 KYPANYNLVD PIERNTAAVP TGGWTAIRFR ADNPGVWFMH CHLELHTGWG LKTAFAVEDG 360 PGPDQSVLPP PTDLPPC* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00394 | Cu-oxidase | 4.0e-42 | 1 | 127 | 127 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02191 | PLN02191 | 3.0e-43 | 31 | 356 | 337 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-57 | 29 | 355 | 332 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-61 | 29 | 358 | 347 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 2 | 377 | 380 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17500.1 | 0 | 2 | 377 | 167 | 542 | unnamed protein product [Vitis vinifera] |
EMBL | CBI32739.1 | 0 | 1 | 377 | 186 | 562 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266464.1 | 0 | 2 | 377 | 188 | 563 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310245.1 | 0 | 1 | 377 | 186 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512915.1 | 0 | 1 | 377 | 182 | 558 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-39 | 20 | 358 | 190 | 526 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asq_A | 2e-39 | 20 | 358 | 190 | 526 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_B | 2e-39 | 20 | 358 | 190 | 526 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_A | 2e-39 | 20 | 358 | 190 | 526 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1aso_B | 2e-39 | 20 | 358 | 190 | 526 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FC458441 | 267 | 35 | 301 | 0 |
EX130854 | 291 | 88 | 378 | 0 |
HO797675 | 382 | 2 | 378 | 0 |
JG725182 | 254 | 125 | 378 | 0 |
FY429827 | 255 | 124 | 378 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|