y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g017328m |
Family | GH14 |
Protein Properties | Length: 374 Molecular Weight: 42224.4 Isoelectric Point: 7.824 |
Chromosome | Chromosome/Scaffold: 12083 Start: 104 End: 2019 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 2 | 328 | 0 |
YSIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRDRFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPG IGEFQCYDKYMRASLKASAEASSNEDWGRSGPHDSGQYNQFPEDTGFFRRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGTGSKLSGKVAGIH WHYRSRSHAAELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNL DAGNGLGAFTYLRMHKKLFESDNWRNL |
Full Sequence |
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Protein Sequence Length: 374 Download |
MYSIPLPPWV LEEISKNPDL VYTDKSGRRN PEYISLGCDT IPLLRGRTPI QVYSDYMRSF 60 RDRFRDYLGD VVQEIQVGLG PCGELRYPAY PESNGTWKFP GIGEFQCYDK YMRASLKASA 120 EASSNEDWGR SGPHDSGQYN QFPEDTGFFR RDGTWNSEYG RFFMEWYSGK LIQHGDRILA 180 AAKEIFQGTG SKLSGKVAGI HWHYRSRSHA AELTAGYYNT RYCDGYIPIA RMLAKHGAIL 240 NFTCMEMRDR EQPGNANCSP EGLVQQVKMA TRTAGVELAG ENALERYDAD AYAQVLATSN 300 LDAGNGLGAF TYLRMHKKLF ESDNWRNLVE FVQRMSSEGR RPRLPEWDST GSDLYVGFVK 360 GKNGKKTKEA AVV* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 4.0e-116 | 4 | 338 | 342 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 2.0e-118 | 3 | 331 | 340 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02801 | PLN02801 | 1.0e-143 | 3 | 335 | 341 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-179 | 3 | 342 | 346 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 3 | 373 | 371 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI39244.1 | 0 | 3 | 373 | 170 | 540 | beta-amylase [Glycine max] |
EMBL | CAN62440.1 | 0 | 3 | 373 | 173 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 3 | 373 | 173 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 3 | 373 | 177 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 3 | 373 | 177 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2dqx_A | 0 | 1 | 338 | 102 | 444 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
PDB | 1q6d_A | 0 | 1 | 338 | 102 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wdp_A | 0 | 1 | 338 | 102 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1q6c_A | 0 | 1 | 338 | 102 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 1 | 338 | 102 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794833 | 372 | 3 | 374 | 0 |
BU103692 | 364 | 3 | 366 | 0 |
HO825836 | 364 | 3 | 366 | 0 |
CO087014 | 299 | 9 | 307 | 0 |
CK293967 | 293 | 3 | 295 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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