y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g017408m |
Family | GH17 |
Protein Properties | Length: 373 Molecular Weight: 41130 Isoelectric Point: 8.6701 |
Chromosome | Chromosome/Scaffold: 00005 Start: 2014157 End: 2016328 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 37 | 355 | 0 |
GINYGRIADNIPSPDEVAVLLRASKIKNVRIYDADHSVLKAFSGTGLELVVGLPNGLVKEMSANESHAMDWVKENVQNFLPKTKICGIAVGNEVLGGADS ELWGALLGAVKNVYNSIKKLHLDDVVQITTAHSQAVFANSYPPSSCIFKEGVDQFMKPLLDFFSQIGSPFCLNVYPFLAYMSDPENIDINYALFQSTQGI DDSKTKLHYDNMLDAQIDAAYAALEDAGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTS ERNFGLFKPDGSIAYDIGF |
Full Sequence |
---|
Protein Sequence Length: 373 Download |
MKKSLRFFLR FHLLLFFSVF FTLIDPKKVQ AFTGTYGINY GRIADNIPSP DEVAVLLRAS 60 KIKNVRIYDA DHSVLKAFSG TGLELVVGLP NGLVKEMSAN ESHAMDWVKE NVQNFLPKTK 120 ICGIAVGNEV LGGADSELWG ALLGAVKNVY NSIKKLHLDD VVQITTAHSQ AVFANSYPPS 180 SCIFKEGVDQ FMKPLLDFFS QIGSPFCLNV YPFLAYMSDP ENIDINYALF QSTQGIDDSK 240 TKLHYDNMLD AQIDAAYAAL EDAGFKKMEV IVTETGWASR GDSNEAAATV DNARTYNYNL 300 RKRLAKKKGT PLRPKNVVKA YVFAIFNENQ KPGPTSERNF GLFKPDGSIA YDIGFHGLKS 360 SSAGSSHLSF KV* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 34 | 346 | 329 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-102 | 37 | 353 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 30 | 371 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 31 | 365 | 29 | 363 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 3 | 371 | 2 | 366 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 30 | 363 | 3 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 9 | 357 | 3 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |