| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g017562m |
| Family | CBM49 |
| Protein Properties | Length: 370 Molecular Weight: 39886.4 Isoelectric Point: 10.0628 |
| Chromosome | Chromosome/Scaffold: 00009 Start: 1491292 End: 1493745 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 277 | 354 | 6.3e-38 |
| IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIH | |||
| GH9 | 6 | 223 | 0 |
| WGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCS AGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNY EQTEPATYNNAPILGILA | |||
| Full Sequence |
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| Protein Sequence Length: 370 Download |
| MGGTGWGMTE FGWDVKYPGV QTLVAKFLMQ GKAGHYAPVF ERYQQKAEYF MCSCLGKGSR 60 NVQKTPGGLI FRQRWNNMQF VTSASFLATV YSDYLASAGR DLKCSAGNVA PAELLGFAKS 120 QVDYILGDNP RATSYMVGYG NNYPQRVHHR ASSIVSIKVN PSFVSCRGGY ATWFSSKGSD 180 PNLLVGAVVG GPDAYDNFGD RRDNYEQTEP ATYNNAPILG ILARLNAGHG GYNQLLPVIV 240 PAATPVVTKP SPAPKPKTIP PTKPKTTPAP ASSSGAIAIQ QKLTTSWISN GKRYYRYSTI 300 VTNKSAKTLK NLKLSISKLY GPLWGLTNLG NAYGFPSWLN NLAAGKSLEF VYIHTANAAD 360 VSVSAYTLA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 2.0e-17 | 283 | 366 | 86 | + endoglucanase | ||
| PLN00119 | PLN00119 | 3.0e-88 | 2 | 225 | 224 | + endoglucanase | ||
| PLN02340 | PLN02340 | 3.0e-95 | 1 | 225 | 226 | + endoglucanase | ||
| PLN02420 | PLN02420 | 3.0e-95 | 1 | 225 | 227 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 1 | 369 | 369 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI68019.1 | 0 | 1 | 369 | 266 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| EMBL | CAI68020.1 | 0 | 1 | 369 | 266 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 1 | 369 | 269 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 1 | 369 | 266 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 1 | 368 | 266 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xfg_A | 4e-20 | 13 | 225 | 280 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ksd_A | 5e-20 | 13 | 227 | 253 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ksc_A | 5e-20 | 13 | 227 | 253 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ks8_A | 5e-20 | 13 | 227 | 253 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia7_A | 1e-18 | 62 | 223 | 291 | 424 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY654794 | 236 | 1 | 236 | 0 |
| EY653361 | 236 | 1 | 236 | 0 |
| HE640823 | 319 | 28 | 346 | 0 |
| CO072186 | 236 | 1 | 236 | 0 |
| HE640823 | 36 | 330 | 365 | 0.47 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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