| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g018249m |
| Family | CE8 |
| Protein Properties | Length: 360 Molecular Weight: 39806 Isoelectric Point: 8.5989 |
| Chromosome | Chromosome/Scaffold: 00053 Start: 406334 End: 408640 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 58 | 350 | 0 |
| ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNIS FKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKSPDEKTGFA FVRCRVTGTGPLYVGRAMGQYSRIVYSFTYFDDLVAHGGWDDWDHISNKNKTAFFGVYKCWGPGAANVRGASWARELDYESAHPFLVKSFING | |||
| Full Sequence |
|---|
| Protein Sequence Length: 360 Download |
| MLFNLMSSVA CFSLFHLYIV TSFLSLALFQ VTISATAQAA NSTKHHPKWI GPVGHRVITV 60 DVNGSGEFKS VQAAVDSVPE RNRMNVLIQI SAGCYIEKVT VPVSKPYITF QGAGRDRTVI 120 EWHDRACDRG ANGQQLRTYQ TASVTVFANY FSARNISFKN TAPAPLPGMQ GWQAAAFRIS 180 GDKAYFSGCG FYGAQDTLCD DAGRHYFKEC YIEGSIDFIF GNGRSMYKDC ELHSIATRFG 240 SIAAHDRKSP DEKTGFAFVR CRVTGTGPLY VGRAMGQYSR IVYSFTYFDD LVAHGGWDDW 300 DHISNKNKTA FFGVYKCWGP GAANVRGASW ARELDYESAH PFLVKSFING RHWIAPSDA* 360 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02665 | PLN02665 | 8.0e-106 | 56 | 356 | 303 | + pectinesterase family protein |
| PLN02304 | PLN02304 | 2.0e-107 | 57 | 359 | 311 | + probable pectinesterase |
| PLN02671 | PLN02671 | 1.0e-114 | 54 | 354 | 303 | + pectinesterase |
| PLN02682 | PLN02682 | 6.0e-133 | 48 | 356 | 323 | + pectinesterase family protein |
| PLN02634 | PLN02634 | 0 | 17 | 359 | 343 | + probable pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD64977.1 | 0 | 2 | 359 | 1 | 360 | pectinesterase family protein [Brassica oleracea] |
| EMBL | CBI31927.1 | 0 | 19 | 359 | 10 | 349 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199561.1 | 0 | 13 | 359 | 7 | 362 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002266321.1 | 0 | 39 | 359 | 36 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 43 | 356 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6.99949e-42 | 53 | 354 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-32 | 63 | 354 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-18 | 67 | 344 | 43 | 354 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 2e-16 | 68 | 234 | 18 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 2e-16 | 68 | 234 | 18 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
