| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g019526m |
| Family | AA7 |
| Protein Properties | Length: 340 Molecular Weight: 39237 Isoelectric Point: 5.6862 |
| Chromosome | Chromosome/Scaffold: 01065 Start: 19552 End: 22852 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 1 | 108 | 8.4e-30 |
| MAADHIVDAHMIDAKGRFLTRESMGEDLFWAIRGSGGSSFGIIVSWKIKLVAVPPTVTVFAVPRTLEQNATRLLHKWQYIADRVHEDLFISPFLYRENST MVCLFTSL | |||
| Full Sequence |
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| Protein Sequence Length: 340 Download |
| MAADHIVDAH MIDAKGRFLT RESMGEDLFW AIRGSGGSSF GIIVSWKIKL VAVPPTVTVF 60 AVPRTLEQNA TRLLHKWQYI ADRVHEDLFI SPFLYRENST MVCLFTSLFL GGVDRLLPLM 120 QQSFPELGLT KEDCREMSFI ESIVYLDGFK IRESINADVL INERFVKRFF IGKADFVTVP 180 IPVEALEGAY DLFYEEDPRT YGLLVFFPYG GKMSEISESE IPFPHRAGNI YTLLYYAEWQ 240 DATDEAYQRH LNMVRKLFNY MTPYVTKNPR AAYINNRDLD IGTNNKLGHT SVQEASVWGK 300 KYFKNNFYRL VQVKTMVDPE DFFRNEQSIP PFNLMKDEL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam08031 | BBE | 5.0e-15 | 272 | 330 | 59 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002299045.1 | 0 | 1 | 333 | 195 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330609.1 | 0 | 1 | 333 | 195 | 532 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330610.1 | 0 | 1 | 333 | 195 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332196.1 | 0 | 1 | 333 | 187 | 525 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333020.1 | 0 | 1 | 333 | 195 | 531 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vte_A | 0 | 1 | 332 | 172 | 513 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 4dns_B | 0 | 2 | 332 | 176 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 2 | 332 | 176 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_B | 0 | 1 | 332 | 173 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 0 | 1 | 332 | 173 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT214485 | 279 | 64 | 340 | 0 |
| CX299253 | 222 | 46 | 267 | 0 |
| CX670244 | 286 | 14 | 297 | 0 |
| CF836720 | 180 | 161 | 340 | 0 |
| EY874628 | 220 | 122 | 340 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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