Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g021844m |
Family | CE8 |
Protein Properties | Length: 307 Molecular Weight: 34414.1 Isoelectric Point: 7.3499 |
Chromosome | Chromosome/Scaffold: 00015 Start: 1397229 End: 1400342 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 286 | 0 |
VTVAQDGTGDYRTVQEAIDRVPLCNTRRTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTG YIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFID |
Full Sequence |
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Protein Sequence Length: 307 Download |
MASCVVTVAQ DGTGDYRTVQ EAIDRVPLCN TRRTLIRISP GVYRQPVYVP KTKNLITLAG 60 LCPENTVLTW NNTATKIEHH QAARVIGTGT FGCGSVIVEG EDFVAENITF ENSAPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQYLKDCYIE GSVDFIFGNS TALIEHCHIH CKSQGFITAQ 180 SRKSSQETTG YVFLRCVITG NGGTGYIYLG RPWGPFGRVV FAFTYMDQCI RHVGWHNWGK 240 VENERSACFY EYRCFGPGSC PAKRETWARE LLDEEAEQFL MHNFIDPDPQ RPWLAQRMAL 300 RIPYSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 7.0e-81 | 6 | 288 | 311 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 9.0e-88 | 5 | 286 | 300 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 6.0e-92 | 1 | 286 | 298 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-97 | 12 | 286 | 292 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 306 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 306 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 5 | 306 | 6 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 306 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 306 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 306 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8.40779e-45 | 6 | 285 | 9 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-34 | 8 | 267 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 6e-18 | 3 | 285 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-18 | 3 | 285 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2nt9_B | 6e-18 | 3 | 285 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 303 | 0 |
DY292725 | 301 | 1 | 291 | 0 |
FC883979 | 283 | 1 | 273 | 0 |
DY263417 | 312 | 1 | 301 | 0 |
FC883956 | 278 | 1 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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