Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g022399m |
Family | AA7 |
Protein Properties | Length: 299 Molecular Weight: 32964.7 Isoelectric Point: 8.2605 |
Chromosome | Chromosome/Scaffold: 00003 Start: 3852391 End: 3855355 |
Description | cytokinin oxidase/dehydrogenase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 106 | 292 | 3.7e-25 |
GNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLA PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVK |
Full Sequence |
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Protein Sequence Length: 299 Download |
MLQNPSFPWL LHLSGFFSQR NWNCKTKHLQ PLASPISSGK LMRYTAASFL RQNNMLFIRS 60 FMVLFLCCIT VKINLCFSGI PYSLKTLTLD GHLNFDEVHN AARDFGNRYQ LLPSAVLHPN 120 SVSDIATTVK HIWEMGSHSE LTVAARGHGH SLQGQAQAHQ GVVINMESLQ GPKMQVYAEN 180 SFYVDVSGGE LWINILHESV KYGLAPKSWT DYLHLTVGGT LSNAGISGQA FQHGPQISNV 240 HQLEVVTGKG EIINCSEKQN SELFHSVLGG LGQFGIITRA RISLEPAPDM VKANYHHG* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01678 | FAD_lactone_ox | 9.0e-9 | 109 | 291 | 184 | + sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1. | ||
TIGR01679 | bact_FAD_ox | 4.0e-9 | 113 | 282 | 176 | + FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. | ||
COG0277 | GlcD | 2.0e-22 | 83 | 293 | 218 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 7.0e-24 | 113 | 256 | 145 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
PLN02441 | PLN02441 | 1.0e-156 | 51 | 292 | 248 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28611.1 | 0 | 40 | 292 | 29 | 281 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270841.1 | 0 | 42 | 292 | 1 | 251 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304773.1 | 0 | 55 | 292 | 1 | 238 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002332424.1 | 0 | 42 | 292 | 1 | 251 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002513118.1 | 0 | 42 | 292 | 1 | 251 | Cytokinin dehydrogenase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1d_A | 0 | 81 | 288 | 17 | 228 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3s1c_A | 0 | 81 | 288 | 17 | 228 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3kjm_A | 0 | 81 | 288 | 17 | 228 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 81 | 288 | 17 | 228 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3c0p_A | 0 | 81 | 288 | 17 | 228 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FS319654 | 251 | 42 | 290 | 0 |
FS319644 | 243 | 52 | 292 | 0 |
FS342515 | 264 | 25 | 278 | 0 |
FS334802 | 236 | 42 | 275 | 0 |
FS334807 | 250 | 29 | 276 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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