| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g023943m |
| Family | GH2 |
| Protein Properties | Length: 276 Molecular Weight: 31543.5 Isoelectric Point: 5.4954 |
| Chromosome | Chromosome/Scaffold: 00295 Start: 134886 End: 142120 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH2 | 73 | 270 | 0 |
| FVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDS AFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLAEDFSLADIQV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 276 Download |
| MASLVGQLPF ALENANGYKV WEDPSFIKWR KRDPHVTLRC HDSVEVSNSA VWDDDAVHEA 60 LTSAAFWTNG LPFVKSLSGH WKFFLASSPP DVPLNFHKSS FQDSKWEAIP VPSNWQMHGF 120 DRPIYTNVVY PFPLDPPNVP AENPTGCYRT YFHIPKEWQG RRILLHFEAV DSAFCAWING 180 VPVGYSQDSR LPAEFEISDY CYPHGSDKKN VLAVQVFRWS DGSYLEDQDH WWLSGIHRDV 240 LLLAKPQVFI ADYFFKSNLA EDFSLADIQV NTCQL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 2.0e-14 | 74 | 272 | 216 | + beta-D-glucuronidase; Provisional | ||
| COG3250 | LacZ | 2.0e-44 | 74 | 271 | 200 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam02837 | Glyco_hydro_2_N | 3.0e-64 | 72 | 246 | 177 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 5.0e-69 | 75 | 271 | 197 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 6.0e-81 | 21 | 272 | 256 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE98865.1 | 0 | 1 | 272 | 1 | 285 | beta Galactosidase - like protein [Arabidopsis thaliana] |
| RefSeq | XP_002266400.1 | 0 | 1 | 272 | 1 | 285 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 272 | 1 | 285 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 270 | 1 | 283 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 272 | 1 | 285 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4duw_D | 0 | 74 | 273 | 80 | 276 | A Chain A, E. Coli (lacz) Beta-galactosidase (g974a) In Complex With Allolactose |
| PDB | 4duw_C | 0 | 74 | 273 | 80 | 276 | A Chain A, E. Coli (lacz) Beta-galactosidase (g974a) In Complex With Allolactose |
| PDB | 4duw_B | 0 | 74 | 273 | 80 | 276 | A Chain A, E. Coli (lacz) Beta-galactosidase (g974a) In Complex With Allolactose |
| PDB | 4duw_A | 0 | 74 | 273 | 80 | 276 | A Chain A, E. Coli (lacz) Beta-galactosidase (g974a) In Complex With Allolactose |
| PDB | 4duv_D | 0 | 74 | 273 | 80 | 276 | A Chain A, E. Coli (lacz) Beta-galactosidase (g974a) In Complex With Allolactose |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CX070336 | 212 | 61 | 272 | 0 |
| CK261494 | 287 | 1 | 272 | 0 |
| EY721342 | 215 | 1 | 211 | 0 |
| HO791335 | 268 | 2 | 254 | 0 |
| EY721342 | 51 | 217 | 267 | 1.5 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |